RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 SH3GLB1Q9Y371 365 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 MRPS23Q9Y3D9 190 aaKnown RBP12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 PCDHA11Q9Y5I1 949 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 NPHP4O75161 1426 aaPredicted RBP12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 LINC00854A0A1B0GVQ3 168 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 TRPC5OSA6NMA1 111 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 TRIM13O60858 407 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 ARF4P18085 180 aaPredicted RBP12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 GEMP55040 296 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 PPP2R2DQ66LE6 453 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 PLA2G4FQ68DD2 849 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 PRMT1Q99873 361 aaKnown RBP12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 ERAP1Q9NZ08 941 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 POLG2Q9UHN1 485 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 MRFAP1Q9Y605 127 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 MYOM2P54296 1465 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 ZNF500O60304 480 aaPredicted RBP12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 TDP2O95551 362 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 CXCR2P25025 360 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 SOX6P35712 828 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 OXCT1P55809 520 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 ZNF589Q86UQ0 364 aaPredicted RBP12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 GRIN3AQ8TCU5 1115 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 ABHD5Q8WTS1 349 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 PMEPA1Q969W9 287 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 THUMPD3Q9BV44 507 aaKnown RBP12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 HEG1Q9ULI3 1381 aa12.42□□□□□ -0.42
SLC6A6-204ENST00000613060 MGAT4DA6NG13 374 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 RPLP2P05387 115 aaKnown RBP12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 TRIM49P0CI25 452 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 TRIM49CP0CI26 452 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 PTPN3P26045 913 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 NCOA4Q13772 614 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 FAM83EQ2M2I3 478 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 CCDC149Q6ZUS6 474 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 SMPDL3BQ92485 455 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 ZNF354BQ96LW1 612 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 VPS33BQ9H267 617 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 XPNPEP3Q9NQH7 507 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 NOX1Q9Y5S8 564 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 VTNP04004 478 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 CYP2F1P24903 491 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 PPP2R1BP30154 601 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 TALDO1P37837 337 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 HSPA9P38646 679 aaKnown RBP12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 CASP6P55212 293 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 BNC1Q01954 994 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 MMRN1Q13201 1228 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 CYP51A1Q16850 503 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 GALNTL6Q49A17 601 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 FRMD5Q7Z6J6 570 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 FAM20CQ8IXL6 584 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 OLFM1Q99784 485 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 SPATA9Q9BWV2 254 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 XPO7Q9UIA9 1087 aaKnown RBP12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 CHKBQ9Y259 395 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 CYP26A1O43174 497 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 TEAD4Q15561 434 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 CLEC16AQ2KHT3 1053 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 ATF7IP2Q5U623 682 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 SP8Q8IXZ3 490 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 UBXN6Q9BZV1 441 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 AHSPQ9NZD4 102 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 IRS2Q9Y4H2 1338 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 TSPOAP1O95153 1857 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 SLC16A3O15427 465 aaKnown RBP12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 PTGER2P43116 358 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 DMWDQ09019 674 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 RPTNQ6XPR3 784 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 YIPF3Q9GZM5 350 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 TLE6Q9H808 572 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 AVENQ9NQS1 362 aaPredicted RBP12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 PTCH1Q13635 1447 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 HBP1O60381 514 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 ITGA3P26006 1051 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 ZNF200P98182 395 aaPredicted RBP12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 ALG13Q9NP73 1137 aaKnown RBP12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 PYCARDQ9ULZ3 195 aa12.41□□□□□ -0.42
SLC6A6-204ENST00000613060 KRT75O95678 551 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 ALBP02768 609 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 RANBP1P43487 201 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 EMC2Q15006 297 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 FAM171A1Q5VUB5 890 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 CCDC81Q6ZN84 652 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 NECAB2Q7Z6G3 386 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 GSPT2Q8IYD1 628 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 FIBCD1Q8N539 461 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 ZNF579Q8NAF0 562 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 PIGBQ92521 554 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SYNPO2Q9UMS6 1093 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 HMGXB3Q12766 1538 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 ZNF286BP0CG31 522 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 LRP8Q14114 963 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 GNA13Q14344 377 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 LRRC14Q15048 493 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 PKN2Q16513 984 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SETMARQ53H47 684 aaPredicted RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 RESP18Q5W5W9 173 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 DET1Q7L5Y6 550 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SETD6Q8TBK2 473 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms