RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PHF2O75151 1096 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 GRAP2O75791 330 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 ZMYND10O75800 440 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 AP1G2O75843 785 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 BEST1O76090 585 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 HEXIM1O94992 359 aaKnown RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 OAZ2O95190 189 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 GLI1P08151 1106 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 RARAP10276 462 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 TNFRSF8P28908 595 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 SDC4P31431 198 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 GJC1P36383 396 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 CTCFP49711 727 aaPredicted RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 MAP3K7CLP57077 242 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 MRPS25P82663 173 aaKnown RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 TSPY1Q01534 308 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 SLC25A11Q02978 314 aaKnown RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 SMC1AQ14683 1233 aaKnown RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 TAF5Q15542 800 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 CYP1B1Q16678 543 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 CCDC142Q17RM4 750 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 CCDC14Q49A88 953 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 MAP9Q49MG5 647 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 ATP13A4Q4VNC1 1196 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 ZFYVE27Q5T4F4 411 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 TRNP1Q6NT89 227 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 CNKSR3Q6P9H4 555 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 RETREG3Q86VR2 466 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 ZDHHC14Q8IZN3 488 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 PRELID2Q8N945 189 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 MYLPFQ96A32 169 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 MAGOHBQ96A72 148 aaKnown RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 SMARCD1Q96GM5 515 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 RUNDC3BQ96NL0 473 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 SLITRK1Q96PX8 696 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 PKMYT1Q99640 499 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 SMOQ99835 787 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 TMEM175Q9BSA9 504 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 OSBPL8Q9BZF1 889 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 HOMER3Q9NSC5 361 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 AMACRQ9UHK6 382 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 USP18Q9UMW8 372 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 FAN1Q9Y2M0 1017 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 PRG3Q9Y2Y8 225 aaPredicted RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 MICAL3Q7RTP6 2002 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 TSC2P49815 1807 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 TCRBV7S2A1N4TA0A589 114 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 TBKBP1A7MCY6 615 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 HSF2BPO75031 334 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 FBXO21O94952 628 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 TRUB2O95900 331 aaKnown RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 KRT1P04264 644 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 RALAP11233 206 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 MIPP30301 263 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 PTPN7P35236 360 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 PTPN9P43378 593 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 GATMP50440 423 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 MRPS5P82675 430 aaKnown RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 ADIGQ0VDE8 80 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 KLF1Q13351 362 aaPredicted RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 DHX34Q14147 1143 aaKnown RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 SIX1Q15475 284 aaPredicted RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 LRRC26Q2I0M4 334 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 BEND6Q5SZJ8 279 aaPredicted RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 C4orf50Q6ZRC1 276 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 NECAB2Q7Z6G3 386 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 LRRTM3Q86VH5 581 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 SIX6OS1Q8N1H7 587 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 C12orf50Q8NA57 414 aaPredicted RBP9.33□□□□□ -0.92
CCDC47-207ENST00000612558 OR10T2Q8NGX3 314 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 CLEC4CQ8WTT0 213 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 RAPGEF5Q92565 580 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 CFAP57Q96MR6 1250 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 LRRC19Q9H756 370 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 ZWILCHQ9H900 591 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 EPB41L5Q9HCM4 733 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 CSNK1G1Q9HCP0 422 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 GDF3Q9NR23 364 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 PCSK1NQ9UHG2 260 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 PCYOX1Q9UHG3 505 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 ADAM28Q9UKQ2 775 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 LRRD1A4D1F6 860 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 PI4K2BG5E9Z4 385 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 ATP8B1O43520 1251 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 PRPSAP2O60256 369 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 TJP3O95049 919 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 TIMP1P01033 207 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 IL1R2P27930 398 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 COILP38432 576 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-207ENST00000612558 MATKP42679 507 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 SLC11A1P49279 550 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 FNTAP49354 379 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 TKTL1P51854 596 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 YWHAZP63104 245 aaKnown RBP9.32□□□□□ -0.92
CCDC47-207ENST00000612558 ATP11AP98196 1134 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 DR1Q01658 176 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 GUCY2DQ02846 1103 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 ADCY1Q08828 1119 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 ELAVL2Q12926 359 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms