RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 LRRC38Q5VT99 294 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 DUPD1Q68J44 220 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 LRRC8EQ6NSJ5 796 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 SPDYE1Q8NFV5 336 aaPredicted RBP8.89□□□□□ -0.99
TMCO1-208ENST00000612311 ZC3H15Q8WU90 426 aaKnown RBP8.89□□□□□ -0.99
TMCO1-208ENST00000612311 SYT15Q9BQS2 421 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 ANLNQ9NQW6 1124 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 KCPQ6ZWJ8 1503 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 SIGLEC16A6NMB1 481 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 ZBBXA8MT70 800 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 TIMM44O43615 452 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 UPP2O95045 317 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 LCA5LO95447 670 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 APOA4P06727 396 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 ACAT1P24752 427 aaKnown RBP8.89□□□□□ -0.99
TMCO1-208ENST00000612311 ETFBP38117 255 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 NOMO3P69849 1222 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 SNX17Q15036 470 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 ATP13A4Q4VNC1 1196 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 FOXR1Q6PIV2 292 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 ZDHHC17Q8IUH5 632 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 ZCCHC9Q8N567 271 aaKnown RBP8.89□□□□□ -0.99
TMCO1-208ENST00000612311 COLGALT1Q8NBJ5 622 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 MFSD14AQ96MC6 490 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 KREMEN1Q96MU8 473 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 RPRD1AQ96P16 312 aaPredicted RBP8.89□□□□□ -0.99
TMCO1-208ENST00000612311 YIPF3Q9GZM5 350 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 CDT1Q9H211 546 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 LRRC19Q9H756 370 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 LMCD1Q9NZU5 365 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 TM9SF1O15321 606 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 E2F6O75461 281 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 ADIGQ0VDE8 80 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 CNGA2Q16280 664 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 AP1ARQ63HQ0 302 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 ELMSAN1Q6PJG2 1045 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 RNF180Q86T96 592 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 MIB1Q86YT6 1006 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 LRRC43Q8N309 656 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 ATXN2LQ8WWM7 1075 aaKnown RBP8.89□□□□□ -0.99
TMCO1-208ENST00000612311 SEMA4DQ92854 862 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 TMA16Q96EY4 203 aaKnown RBP8.89□□□□□ -0.99
TMCO1-208ENST00000612311 MRPL1Q9BYD6 325 aaKnown RBP8.89□□□□□ -0.99
TMCO1-208ENST00000612311 DDX43Q9NXZ2 648 aaKnown RBP8.89□□□□□ -0.99
TMCO1-208ENST00000612311 DCDC2Q9UHG0 476 aa8.89□□□□□ -0.99
TMCO1-208ENST00000612311 AAR2Q9Y312 384 aaKnown RBP8.89□□□□□ -0.99
TMCO1-208ENST00000612311 TIMM13Q9Y5L4 95 aaPredicted RBP8.89□□□□□ -0.99
TMCO1-208ENST00000612311 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.88□□□□□ -0.99
TMCO1-208ENST00000612311 KBTBD13C9JR72 458 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 FSCN2O14926 492 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 ANGPT2O15123 496 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 AMPD1P23109 780 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 KDELR1P24390 212 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 HADHAP40939 763 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 TNFSF9P41273 254 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 FCGRTP55899 365 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 SLC6A3Q01959 620 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 RRP1BQ14684 758 aaKnown RBP8.88□□□□□ -0.99
TMCO1-208ENST00000612311 PKN2Q16513 984 aaKnown RBP8.88□□□□□ -0.99
TMCO1-208ENST00000612311 LRRC36Q1X8D7 754 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 PHF13Q86YI8 300 aaPredicted RBP8.88□□□□□ -0.99
TMCO1-208ENST00000612311 ARHGAP18Q8N392 663 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 ATP6V0D2Q8N8Y2 350 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 RMDN2Q96LZ7 410 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 ILKAPQ9H0C8 392 aaPredicted RBP8.88□□□□□ -0.99
TMCO1-208ENST00000612311 RIPK3Q9Y572 518 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 MROH7Q68CQ1 1323 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 ABCC6O95255 1503 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 M0R2N6 131 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 RECQL4O94761 1208 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 ANP32DO95626 131 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 PYGLP06737 847 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 NFICP08651 508 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 CNTFP26441 200 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 MGAT5Q09328 741 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 PDE1CQ14123 709 aaPredicted RBP8.88□□□□□ -0.99
TMCO1-208ENST00000612311 CAPRIN2Q6IMN6 1127 aaKnown RBP8.88□□□□□ -0.99
TMCO1-208ENST00000612311 ANGPTL8Q6UXH0 198 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 SETD3Q86TU7 594 aaPredicted RBP8.88□□□□□ -0.99
TMCO1-208ENST00000612311 IQCKQ8N0W5 287 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 SHCBP1Q8NEM2 672 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 SLC2A14Q8TDB8 520 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 TCP10LQ8TDR4 215 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 ACO2Q99798 780 aaKnown RBP8.88□□□□□ -0.99
TMCO1-208ENST00000612311 MRGBPQ9NV56 204 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 AFF4Q9UHB7 1163 aaKnown RBP8.88□□□□□ -0.99
TMCO1-208ENST00000612311 SALL4Q9UJQ4 1053 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 CASTOR2A6NHX0 329 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 OPLAHO14841 1288 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 ASS1P00966 412 aaKnown RBP8.88□□□□□ -0.99
TMCO1-208ENST00000612311 FECHP22830 423 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 RPL7AP62424 266 aaKnown RBP8.88□□□□□ -0.99
TMCO1-208ENST00000612311 PHEXP78562 749 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 SREBF2Q12772 1141 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 FAM83EQ2M2I3 478 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 EEF1DP3Q658K8 133 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 TAF2Q6P1X5 1199 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 PRUNE1Q86TP1 453 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 KIAA0319LQ8IZA0 1049 aa8.88□□□□□ -0.99
TMCO1-208ENST00000612311 DEFB106AQ8N104 65 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms