RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 FAM182AQ5T1J6 154 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 GKAP1Q5VSY0 366 aaPredicted RBP14.2□□□□□ -0.14
NEK3-205ENST00000610828 CXCL17Q6UXB2 119 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 SLC26A9Q7LBE3 791 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 TAX1BP1Q86VP1 789 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 PLD5Q8N7P1 536 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 B3GALNT2Q8NCR0 500 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 TRPV1Q8NER1 839 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 MLXIPLQ9NP71 852 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 CDY2AQ9Y6F7 541 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 TRPM7Q96QT4 1865 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 MEIS3P2A8K0S8 358 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 RASA4BC9J798 803 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 APOL1O14791 398 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 MDM4O15151 490 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 RASA4O43374 803 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 MAP3K6O95382 1288 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 IGHA2P01877 340 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 CTSHP09668 335 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 BCAR1P56945 870 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 MRPS6P82932 125 aaKnown RBP14.2□□□□□ -0.14
NEK3-205ENST00000610828 CCDC142Q17RM4 750 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 MSS51Q4VC12 460 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 PYROXD1Q8WU10 500 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 MRRFQ96E11 262 aaKnown RBP14.2□□□□□ -0.14
NEK3-205ENST00000610828 SEC16BQ96JE7 1060 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 CACNG4Q9UBN1 327 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 XPO7Q9UIA9 1087 aaKnown RBP14.2□□□□□ -0.14
NEK3-205ENST00000610828 ATP2C2O75185 946 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 TMEM63AO94886 807 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 PGK1P00558 417 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 VIMP08670 466 aaKnown RBP14.19□□□□□ -0.14
NEK3-205ENST00000610828 RARBP10826 455 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 ACAT1P24752 427 aaKnown RBP14.19□□□□□ -0.14
NEK3-205ENST00000610828 GCAP28676 217 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 TKTP29401 623 aaKnown RBP14.19□□□□□ -0.14
NEK3-205ENST00000610828 PTPN9P43378 593 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 INHBEP58166 350 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 SYCP2LQ5T4T6 812 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 OSTM1Q86WC4 334 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 CACNA2D3Q8IZS8 1091 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 RIBC1Q8N443 379 aaPredicted RBP14.19□□□□□ -0.14
NEK3-205ENST00000610828 OTUD6BQ8N6M0 293 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 PQLC3Q8N755 202 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 PCDH19Q8TAB3 1148 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 CABS1Q96KC9 395 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 NCAPGQ9BPX3 1015 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 ADAM33Q9BZ11 813 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 EURLQ9NYK6 297 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 CYB561D2O14569 222 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 TGM2P21980 687 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 ACADSBP45954 432 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 NBPF20Q3BBV1 942 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 RNF187Q5TA31 235 aaPredicted RBP14.19□□□□□ -0.14
NEK3-205ENST00000610828 LIMS2Q7Z4I7 341 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 LRRC34Q8IZ02 419 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 PDIK1LQ8N165 341 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 TOP6BLQ8N6T0 577 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 PPP1R10Q96QC0 940 aaKnown RBP14.19□□□□□ -0.14
NEK3-205ENST00000610828 ZNF670Q9BS34 389 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 MTG1Q9BT17 334 aaPredicted RBP14.19□□□□□ -0.14
NEK3-205ENST00000610828 DHX35Q9H5Z1 703 aaKnown RBP14.19□□□□□ -0.14
NEK3-205ENST00000610828 CCDC134Q9H6E4 229 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 GTF2IRD1Q9UHL9 959 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 ST3GAL5Q9UNP4 418 aa14.19□□□□□ -0.14
NEK3-205ENST00000610828 ATXN2Q99700 1313 aaKnown RBP14.19□□□□□ -0.14
NEK3-205ENST00000610828 KCNN4O15554 427 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 SLC10A3P09131 477 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 IGFBP6P24592 240 aaPredicted RBP14.18□□□□□ -0.14
NEK3-205ENST00000610828 MLH1P40692 756 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 SLC8A3P57103 927 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 BBS9Q3SYG4 887 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 WSCD1Q658N2 575 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 TADA2BQ86TJ2 420 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 PIGZQ86VD9 579 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 FAM149B1Q96BN6 582 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 HSFY1Q96LI6 401 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 CYLDQ9NQC7 956 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 GGA2Q9UJY4 613 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 CLDN5O00501 218 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 WARSP23381 471 aaKnown RBP14.18□□□□□ -0.14
NEK3-205ENST00000610828 LRPAP1P30533 357 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 SSTR1P30872 391 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 RPL34P49207 117 aaKnown RBP14.18□□□□□ -0.14
NEK3-205ENST00000610828 GPX6P59796 221 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 ADIGQ0VDE8 80 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 SF3A3Q12874 501 aaKnown RBP eCLIP14.18□□□□□ -0.142e-6■■□□□ 13.9
NEK3-205ENST00000610828 MPP2Q14168 576 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 SLC9A4Q6AI14 798 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 GDF6Q6KF10 455 aaPredicted RBP14.18□□□□□ -0.14
NEK3-205ENST00000610828 FUKQ8N0W3 1084 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 ATP11CQ8NB49 1132 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 FBXO36Q8NEA4 188 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 GDAP1Q8TB36 358 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 LRRN4Q8WUT4 740 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 MAML1Q92585 1016 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 C11orf84Q9BUA3 381 aaPredicted RBP14.18□□□□□ -0.14
NEK3-205ENST00000610828 TSPYL2Q9H2G4 693 aaPredicted RBP14.18□□□□□ -0.14
NEK3-205ENST00000610828 UBN1Q9NPG3 1134 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 FAM105AQ9NUU6 356 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms