RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 VARSP26640 1264 aaKnown RBP12.41□□□□□ -0.42
TP53-220ENST00000610623 SSTR1P30872 391 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 HOXA13P31271 388 aaPredicted RBP12.41□□□□□ -0.42
TP53-220ENST00000610623 ACADVLP49748 655 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 NCKAP1LP55160 1127 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 ZNF280AP59817 542 aaPredicted RBP12.41□□□□□ -0.42
TP53-220ENST00000610623 PPIDQ08752 370 aaKnown RBP12.41□□□□□ -0.42
TP53-220ENST00000610623 MYLK3Q32MK0 819 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 USP41Q3LFD5 358 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 HSF5Q4G112 596 aaPredicted RBP12.41□□□□□ -0.42
TP53-220ENST00000610623 ODR4Q5SWX8 454 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 OGFRL1Q5TC84 451 aaPredicted RBP12.41□□□□□ -0.42
TP53-220ENST00000610623 KLHL35Q6PF15 583 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 TRIM67Q6ZTA4 783 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 ANKMY2Q8IV38 441 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 C12orf56Q8IXR9 622 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 SNRNP27Q8WVK2 155 aaKnown RBP12.41□□□□□ -0.42
TP53-220ENST00000610623 KLF6Q99612 283 aaPredicted RBP12.41□□□□□ -0.42
TP53-220ENST00000610623 HSD17B14Q9BPX1 270 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 SENP6Q9GZR1 1112 aaPredicted RBP12.41□□□□□ -0.42
TP53-220ENST00000610623 DEFB129Q9H1M3 183 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 RAB26Q9ULW5 256 aa12.41□□□□□ -0.42
TP53-220ENST00000610623 CD48P09326 243 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 UNGP13051 313 aaPredicted RBP12.4□□□□□ -0.42
TP53-220ENST00000610623 RAB15P59190 212 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 CCNIQ14094 377 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 KRT81Q14533 505 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 EFTUD2Q15029 972 aaKnown RBP eCLIP12.4□□□□□ -0.421e-8■■■■■ 45.7
TP53-220ENST00000610623 TLR1Q15399 786 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 C1orf220Q5T0J3 134 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
TP53-220ENST00000610623 PGM2L1Q6PCE3 622 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 TSHZ1Q6ZSZ6 1077 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 SH2D5Q6ZV89 423 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 SIKE1Q9BRV8 207 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 YIPF2Q9BWQ6 316 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 PCDH9Q9HC56 1237 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 PICK1Q9NRD5 415 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 PADI4Q9UM07 663 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 AK5Q9Y6K8 562 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 IGLV3-22A0A075B6J6 115 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 PRR5-ARHGAP8B1AHC4 643 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 E5RJQ4 531 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 WDR46O15213 610 aaKnown RBP12.4□□□□□ -0.42
TP53-220ENST00000610623 CFBP00751 764 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 NR1H2P55055 460 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 ARHGAP8P85298 464 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 CREB5Q02930 508 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 BTKQ06187 659 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 NFX1Q12986 1120 aaKnown RBP12.4□□□□□ -0.42
TP53-220ENST00000610623 MDH1BQ5I0G3 518 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 LRRC8BQ6P9F7 803 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 ARID3BQ8IVW6 561 aaPredicted RBP12.4□□□□□ -0.42
TP53-220ENST00000610623 RCOR2Q8IZ40 523 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 TMEM206Q9H813 350 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 PPP1R1BQ9UD71 204 aaPredicted RBP12.4□□□□□ -0.42
TP53-220ENST00000610623 DTNAQ9Y4J8 743 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 IKBKGQ9Y6K9 419 aa12.4□□□□□ -0.42
TP53-220ENST00000610623 E7ESA3 106 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 FAM155BO75949 473 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 ITGAVP06756 1048 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 COL9A1P20849 921 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 PMLP29590 882 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 SLC5A2P31639 672 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 HIRAP54198 1017 aaPredicted RBP12.39□□□□□ -0.43
TP53-220ENST00000610623 MCCD1P59942 119 aaPredicted RBP12.39□□□□□ -0.43
TP53-220ENST00000610623 COG7P83436 770 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 ZNF200P98182 395 aaPredicted RBP12.39□□□□□ -0.43
TP53-220ENST00000610623 SPIDRQ14159 915 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 LPIN1Q14693 890 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 Q6ZNX1 250 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 NUDT18Q6ZVK8 323 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 ZNF410Q86VK4 478 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 ERI1Q8IV48 349 aaKnown RBP12.39□□□□□ -0.43
TP53-220ENST00000610623 PALM2Q8IXS6 379 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 RAB3IL1Q8TBN0 382 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 LPAR1Q92633 364 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 GRIP2Q9C0E4 1043 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 C6orf203Q9P0P8 240 aaPredicted RBP12.39□□□□□ -0.43
TP53-220ENST00000610623 ZNHIT2Q9UHR6 403 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 BCS1LQ9Y276 419 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 NR2E3Q9Y5X4 410 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 SNCAIPQ9Y6H5 919 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 ZHX2Q9Y6X8 837 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 ZNFX1Q9P2E3 1918 aaKnown RBP12.39□□□□□ -0.43
TP53-220ENST00000610623 SH3PXD2BA1X283 911 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 DNAJA2O60884 412 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 CBFA2T3O75081 653 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 PDE5AO76074 875 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 ETS1P14921 441 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 SERPINB6P35237 376 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 ALDH18A1P54886 795 aaKnown RBP12.39□□□□□ -0.43
TP53-220ENST00000610623 AQP5P55064 265 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 VCPP55072 806 aaKnown RBP12.39□□□□□ -0.43
TP53-220ENST00000610623 OXCT1P55809 520 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 TAS2R40P59535 323 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 ALCAMQ13740 583 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 BTG3Q14201 252 aaPredicted RBP12.39□□□□□ -0.43
TP53-220ENST00000610623 GRAMD1BQ3KR37 738 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 CCDC92Q53HC0 331 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms