RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 MTAPQ13126 283 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 MAN2A1Q16706 1144 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 EXOC3L4Q17RC7 722 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 EML3Q32P44 896 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 C10orf120Q5SQS8 335 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 SASS6Q6UVJ0 657 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 ENOSF1Q7L5Y1 443 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 CCDC186Q7Z3E2 898 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 PIGZQ86VD9 579 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 ARHGEF19Q8IW93 802 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 SIX6OS1Q8N1H7 587 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 RBBP8NLQ8NC74 664 aaPredicted RBP14.1□□□□□ -0.15
SENP3-209ENST00000610454 LMO3Q8TAP4 145 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 GPT2Q8TD30 523 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 CRACR2AQ9BSW2 395 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 UBE2TQ9NPD8 197 aaPredicted RBP14.1□□□□□ -0.15
SENP3-209ENST00000610454 CYLDQ9NQC7 956 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 LSM7Q9UK45 103 aaKnown RBP14.1□□□□□ -0.15
SENP3-209ENST00000610454 FBXO4Q9UKT5 387 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 A0A1W2PQH9 124 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 GTPBP10A4D1E9 387 aaKnown RBP14.09□□□□□ -0.15
SENP3-209ENST00000610454 OTOL1A6NHN0 477 aaPredicted RBP14.09□□□□□ -0.15
SENP3-209ENST00000610454 M0QYV0 167 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 O00370 1275 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 SCAMP3O14828 347 aaKnown RBP14.09□□□□□ -0.15
SENP3-209ENST00000610454 XPO1O14980 1071 aaKnown RBP14.09□□□□□ -0.15
SENP3-209ENST00000610454 ADH1CP00326 375 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 TPM2P07951 284 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 SP9P0CG40 484 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 GJA4P35212 333 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 MRE11P49959 708 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 TKTL1P51854 596 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 ZXDBP98169 803 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 CSTF1Q05048 431 aaKnown RBP14.09□□□□□ -0.15
SENP3-209ENST00000610454 PDE4CQ08493 712 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 TRIM65Q6PJ69 517 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 RSRC2Q7L4I2 434 aaKnown RBP14.09□□□□□ -0.15
SENP3-209ENST00000610454 ALYREFQ86V81 257 aaKnown RBP14.09□□□□□ -0.15
SENP3-209ENST00000610454 TTC30AQ86WT1 665 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 SYNPOQ8N3V7 929 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 UBR7Q8N806 425 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 UBA3Q8TBC4 463 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 KAT5Q92993 513 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 OTUB2Q96DC9 234 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 P2RY13Q9BPV8 354 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 RBM12Q9NTZ6 932 aaKnown RBP14.09□□□□□ -0.15
SENP3-209ENST00000610454 DNMT3LQ9UJW3 386 aa14.09□□□□□ -0.15
SENP3-209ENST00000610454 TRDMT1O14717 391 aaKnown RBP14.08□□□□□ -0.16
SENP3-209ENST00000610454 MED7O43513 233 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 ZBED1O96006 694 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 DRD1P21728 446 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 BRD2P25440 801 aaKnown RBP14.08□□□□□ -0.16
SENP3-209ENST00000610454 NBL1P41271 181 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 FZD5Q13467 585 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 ZNF528Q3MIS6 628 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 HSP90AA4PQ58FG1 418 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 LCLAT1Q6UWP7 414 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 IRF2BP1Q8IU81 584 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 ZNF687Q8N1G0 1237 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 SPEM1Q8N4L4 309 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 CCDC26Q8TAB7 109 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 CD101Q93033 1021 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 NKD2Q969F2 451 aaPredicted RBP14.08□□□□□ -0.16
SENP3-209ENST00000610454 MED15Q96RN5 788 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 PHOX2BQ99453 314 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 TUBGCP2Q9BSJ2 902 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 LINC00597Q9H2U6 94 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 NMUR1Q9HB89 426 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.08□□□□□ -0.16
SENP3-209ENST00000610454 ANO10Q9NW15 660 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 CLIC5Q9NZA1 410 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 APEX2Q9UBZ4 518 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 STRIP2Q9ULQ0 834 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.08□□□□□ -0.16
SENP3-209ENST00000610454 USP3Q9Y6I4 520 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 VPS13AQ96RL7 3174 aa14.08□□□□□ -0.16
SENP3-209ENST00000610454 KCNJ18B7U540 433 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 ATG13O75143 517 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 USP8P40818 1118 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 PLA2G4AP47712 749 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 CXCL12P48061 93 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 NRLP54845 237 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 YWHAGP61981 247 aaKnown RBP eCLIP14.07□□□□□ -0.16
SENP3-209ENST00000610454 ADIGQ0VDE8 80 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 CCINQ13939 588 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 KCNJ12Q14500 433 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 CNGA2Q16280 664 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 ARHGAP44Q17R89 818 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 FBXO43Q4G163 708 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 TMEM196Q5HYL7 178 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 RAB41Q5JT25 222 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 CCDC183Q5T5S1 534 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 BTBD8Q5XKL5 378 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 KLHDC10Q6PID8 442 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 MIB1Q86YT6 1006 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 ATRIPQ8WXE1 791 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 GOLGA1Q92805 767 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 ZFRQ96KR1 1074 aaKnown RBP14.07□□□□□ -0.16
SENP3-209ENST00000610454 KREMEN1Q96MU8 473 aa14.07□□□□□ -0.16
SENP3-209ENST00000610454 FAM126AQ9BYI3 521 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms