RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CSH1P0DML2 217 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 CSH2P0DML3 217 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 PPP2R5DQ14738 602 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 LY6KQ17RY6 165 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 TCHHL1Q5QJ38 904 aaPredicted RBP21.23■□□□□ 0.99
SSBP3-216ENST00000610401 EEF1DP3Q658K8 133 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 SAR1AQ9NR31 198 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 MAN1C1Q9NR34 630 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 MTO1Q9Y2Z2 717 aaKnown RBP21.23■□□□□ 0.99
SSBP3-216ENST00000610401 TM9SF1O15321 606 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 KRT7P08729 469 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 ACADSP16219 412 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 NCF2P19878 526 aaPredicted RBP21.22■□□□□ 0.99
SSBP3-216ENST00000610401 CCNG1P51959 295 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 PGGT1BP53609 377 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 CXCL9Q07325 125 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 PCGF5Q86SE9 256 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 GBP5Q96PP8 586 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 PANX3Q96QZ0 392 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 C17orf75Q9HAS0 396 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 SLFN12LQ6IEE8 588 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 SCUBE1Q8IWY4 988 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 WRNIP1Q96S55 665 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 FAM49BQ9NUQ9 324 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 RBBP6Q7Z6E9 1792 aaKnown RBP21.22■□□□□ 0.99
SSBP3-216ENST00000610401 OPHN1O60890 802 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 ITGB3P05106 788 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 AMHR2Q16671 573 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 BBS12Q6ZW61 710 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 TRIM4Q9C037 500 aa21.22■□□□□ 0.99
SSBP3-216ENST00000610401 ITM2AO43736 263 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 ZBED1O96006 694 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 ETV4P43268 484 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 CA9Q16790 459 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 SLC44A1Q8WWI5 657 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 MTBPQ96DY7 904 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 FGD4Q96M96 766 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 SDCBP2Q9H190 292 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 MRPL42Q9Y6G3 142 aaKnown RBP21.21■□□□□ 0.99
SSBP3-216ENST00000610401 ANKRD31Q8N7Z5 1873 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 CIB2O75838 187 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 RARBP10826 455 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 SESN2P58004 480 aaPredicted RBP21.21■□□□□ 0.99
SSBP3-216ENST00000610401 MRPS5P82675 430 aaKnown RBP21.21■□□□□ 0.99
SSBP3-216ENST00000610401 OLIG2Q13516 323 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 RXFP2Q8WXD0 754 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 TUBGCP5Q96RT8 1024 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 MYOZ2Q9NPC6 264 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 ARHGEF4Q9NR80 690 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 SLC7A8Q9UHI5 535 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 LNPEPQ9UIQ6 1025 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 LRCH1Q9Y2L9 728 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 AFG3L2Q9Y4W6 797 aa21.21■□□□□ 0.99
SSBP3-216ENST00000610401 SERPINB6P35237 376 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 ULK2Q8IYT8 1036 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 PGBD4Q96DM1 585 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 B3GNT5Q9BYG0 378 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 R3HDMLQ9H3Y0 253 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 SEPT10Q9P0V9 454 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 LTBP1Q14766 1721 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 NRXN2Q9P2S2 1712 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 UBR3Q6ZT12 1888 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 SPECC1L-ADORA2AF8WAN1 911 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 LDHAP00338 332 aaKnown RBP21.2■□□□□ 0.98
SSBP3-216ENST00000610401 NFICP08651 508 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 TFE3P19532 575 aaPredicted RBP21.2■□□□□ 0.98
SSBP3-216ENST00000610401 ADORA2AP29274 412 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 POLR2BP30876 1174 aaKnown RBP21.2■□□□□ 0.98
SSBP3-216ENST00000610401 NAMPTP43490 491 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 CLCN3P51790 818 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 RAPH1Q70E73 1250 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 SCUBE3Q8IX30 993 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 GPRASP2Q96D09 838 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 ZNF184Q99676 751 aaPredicted RBP21.2■□□□□ 0.98
SSBP3-216ENST00000610401 PHACTR1Q9C0D0 580 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 ZNF358Q9NW07 568 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 TCRBV5S1A1TA0A578 114 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 PRKCBP05771 671 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 ASPAP45381 313 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 FKBP1AP62942 108 aaKnown RBP21.2■□□□□ 0.98
SSBP3-216ENST00000610401 YWHAZP63104 245 aaKnown RBP21.2■□□□□ 0.98
SSBP3-216ENST00000610401 DRICH1Q6PGQ1 229 aaPredicted RBP21.2■□□□□ 0.98
SSBP3-216ENST00000610401 XYLT1Q86Y38 959 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 MFHAS1Q9Y4C4 1052 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 AK5Q9Y6K8 562 aa21.2■□□□□ 0.98
SSBP3-216ENST00000610401 PRPSAP2O60256 369 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 KRT37O76014 449 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 SAT1P21673 171 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 BCAR1P56945 870 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 SLC26A11Q86WA9 606 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 CRLF3Q8IUI8 442 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 C7orf31Q8N865 590 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 DEPDC1BQ8WUY9 529 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 STRIP2Q9ULQ0 834 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 ANPEPP15144 967 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 HSPA1LP34931 641 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 CLDN10P78369 228 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 Q3C1V9 767 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 ZNF667Q5HYK9 610 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 PPM1JQ5JR12 505 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms