RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 GKN1Q9NS71 199 aa15.03■□□□□ -0
HDDC2-209ENST00000609477 TAB2Q9NYJ8 693 aa15.03■□□□□ -0
HDDC2-209ENST00000609477 TBC1D14Q9P2M4 693 aa15.03■□□□□ -0
HDDC2-209ENST00000609477 SIT1Q9Y3P8 196 aa15.03■□□□□ -0
HDDC2-209ENST00000609477 COL4A2P08572 1712 aa15.03■□□□□ -0
HDDC2-209ENST00000609477 MYO16Q9Y6X6 1858 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 E2F8A0AVK6 867 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 LEFTY2O00292 366 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 CYP26A1O43174 497 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 MBL2P11226 248 aaPredicted RBP15.02■□□□□ -0
HDDC2-209ENST00000609477 UCHL3P15374 230 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 GNA15P30679 374 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 RPL34P49207 117 aaKnown RBP15.02■□□□□ -0
HDDC2-209ENST00000609477 TKTL1P51854 596 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 COPB1P53618 953 aaKnown RBP15.02■□□□□ -0
HDDC2-209ENST00000609477 GOLGA8FQ08AF8 430 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 GOLGA8DPQ0D2H9 430 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 NR1H3Q13133 447 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 RUNX3Q13761 415 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 ARHGAP44Q17R89 818 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 DPY19L2P1Q6NXN4 242 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 TPRG1Q6ZUI0 275 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 GPIHBP1Q8IV16 184 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 FAM71AQ8IYT1 594 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 AOPEPQ8N6M6 819 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 PJA1Q8NG27 643 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 IRGQQ8WZA9 623 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 NACA2Q9H009 215 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.02■□□□□ -0
HDDC2-209ENST00000609477 DUS2Q9NX74 493 aaKnown RBP15.02■□□□□ -0
HDDC2-209ENST00000609477 CPQQ9Y646 472 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 PIAS3Q9Y6X2 628 aa15.02■□□□□ -0
HDDC2-209ENST00000609477 TICRRQ7Z2Z1 1910 aa15.02□□□□□ -0.01
HDDC2-209ENST00000609477 SYCE3A1L190 88 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 LGALS16A8MUM7 142 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 BECN2A8MW95 431 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 M0QYV0 167 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 FBXO21O94952 628 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 COL9A1P20849 921 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 BRD2P25440 801 aaKnown RBP15.01□□□□□ -0.01
HDDC2-209ENST00000609477 USP8P40818 1118 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 GPD2P43304 727 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 ACADSBP45954 432 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 IFNAR2P48551 515 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 KPNA1P52294 538 aaPredicted RBP15.01□□□□□ -0.01
HDDC2-209ENST00000609477 GJB7Q6PEY0 223 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 SIX6OS1Q8N1H7 587 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 CPA6Q8N4T0 437 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 UBA3Q8TBC4 463 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 ZSWIM1Q9BR11 485 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 IER2Q9BTL4 223 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 NAA15Q9BXJ9 866 aaKnown RBP15.01□□□□□ -0.01
HDDC2-209ENST00000609477 STK33Q9BYT3 514 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 IRF2BPLQ9H1B7 796 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 HSD3B7Q9H2F3 369 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 CCSER2Q9H7U1 834 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 LTB4R2Q9NPC1 389 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 OLA1Q9NTK5 396 aaKnown RBP15.01□□□□□ -0.01
HDDC2-209ENST00000609477 DNMT3LQ9UJW3 386 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 NAGPAQ9UK23 515 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 PCDHGC3Q9UN70 934 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 KMT2EQ8IZD2 1858 aa15.01□□□□□ -0.01
HDDC2-209ENST00000609477 A0A1W2PQH9 124 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 FOXN3O00409 490 aaPredicted RBP15□□□□□ -0.01
HDDC2-209ENST00000609477 SART1O43290 800 aaKnown RBP15□□□□□ -0.01
HDDC2-209ENST00000609477 NFATC1O95644 943 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 RARGP13631 454 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 RPS9P46781 194 aaKnown RBP15□□□□□ -0.01
HDDC2-209ENST00000609477 SNX16P57768 344 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 ZXDBP98169 803 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 PMF1Q6P1K2 205 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 SCD5Q86SK9 330 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 DHX40Q8IX18 779 aaKnown RBP15□□□□□ -0.01
HDDC2-209ENST00000609477 TMEM105Q8N8V8 129 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 FAM3CQ92520 227 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 SECISBP2LQ93073 1101 aaKnown RBP15□□□□□ -0.01
HDDC2-209ENST00000609477 CLDN23Q96B33 292 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 ZFYVE19Q96K21 471 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 ZFRQ96KR1 1074 aaKnown RBP15□□□□□ -0.01
HDDC2-209ENST00000609477 ERGIC2Q96RQ1 377 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 LHX5Q9H2C1 402 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 NMUR1Q9HB89 426 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 GTSE1Q9NYZ3 720 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 ZNF318Q5VUA4 2279 aa15□□□□□ -0.01
HDDC2-209ENST00000609477 FAM170BA6NMN3 283 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 SPECC1L-ADORA2AF8WAN1 911 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 TULP2O00295 520 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 THAP12O43422 761 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 CTHP32929 405 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 VCPP55072 806 aaKnown RBP14.99□□□□□ -0.01
HDDC2-209ENST00000609477 YWHAGP61981 247 aaKnown RBP eCLIP14.99□□□□□ -0.01
HDDC2-209ENST00000609477 TPM4P67936 248 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 COG7P83436 770 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 APBA1Q02410 837 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 UBXN1Q04323 297 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 ADIGQ0VDE8 80 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 DRAP1Q14919 205 aaPredicted RBP14.99□□□□□ -0.01
HDDC2-209ENST00000609477 IQCB1Q15051 598 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 EML3Q32P44 896 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 IER5LQ5T953 404 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms