RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 SHBGP04278 402 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 CKBP12277 381 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 MAP2K2P36507 400 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 EIF3EP60228 445 aaKnown RBP11.94□□□□□ -0.5
LINC01278-204ENST00000609143 MMRN1Q13201 1228 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 CCDC142Q17RM4 750 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 TIGD5Q53EQ6 642 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 KIAA0319Q5VV43 1072 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 LEKR1Q6ZMV7 388 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 ECHDC2Q86YB7 292 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 GLIS1Q8NBF1 620 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 FAM149B1Q96BN6 582 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 RNF157Q96PX1 679 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 C11orf84Q9BUA3 381 aaPredicted RBP11.94□□□□□ -0.5
LINC01278-204ENST00000609143 TMEM109Q9BVC6 243 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 PCDH18Q9HCL0 1135 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 INPP5FQ9Y2H2 1132 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 TIMM13Q9Y5L4 95 aaPredicted RBP11.94□□□□□ -0.5
LINC01278-204ENST00000609143 PTCH2Q9Y6C5 1203 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 TDRD15B5MCY1 1934 aaKnown RBP11.94□□□□□ -0.5
LINC01278-204ENST00000609143 ZNF487B1APH4 448 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 SHOX2O60902 331 aaPredicted RBP11.94□□□□□ -0.5
LINC01278-204ENST00000609143 DAB1O75553 588 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 B3GAT3O94766 335 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 ZSCAN5DPP0CG00 497 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 ETS1P14921 441 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 PECAM1P16284 738 aaPredicted RBP11.94□□□□□ -0.5
LINC01278-204ENST00000609143 MATKP42679 507 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 APLP1P51693 650 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 MRPS5P82675 430 aaKnown RBP11.94□□□□□ -0.5
LINC01278-204ENST00000609143 ERMARDQ5T6L9 678 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 EMC10Q5UCC4 262 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 STRADAQ7RTN6 431 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 FAM35AQ86V20 835 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 ZCCHC9Q8N567 271 aaKnown RBP11.94□□□□□ -0.5
LINC01278-204ENST00000609143 P3H4Q92791 437 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 PAAF1Q9BRP4 392 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 ZNF670Q9BS34 389 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 TRPV6Q9H1D0 765 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 STARD7Q9NQZ5 370 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 GPATCH2LQ9NWQ4 482 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 DSEQ9UL01 958 aa11.94□□□□□ -0.5
LINC01278-204ENST00000609143 A0A1W2PQ45 241 aaPredicted RBP11.93□□□□□ -0.5
LINC01278-204ENST00000609143 A0A1W2PQY0 241 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 ARHGEF37A1IGU5 675 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 AP1G2O75843 785 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 FBXO21O94952 628 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 RBP3P10745 1247 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 MORF4L2Q15014 288 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 NOMO1Q15155 1222 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 ZC3H12AQ5D1E8 599 aaKnown RBP11.93□□□□□ -0.5
LINC01278-204ENST00000609143 PCGF5Q86SE9 256 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 MYCBPAPQ8TBZ2 947 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 ADAM7Q9H2U9 754 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 CALCOCO1Q9P1Z2 691 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 SHOC2Q9UQ13 582 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 APOL1O14791 398 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 BEST1O76090 585 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 TTC4O95801 387 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 TFE3P19532 575 aaPredicted RBP11.93□□□□□ -0.5
LINC01278-204ENST00000609143 TGM2P21980 687 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 ATP1A2P50993 1020 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 MAP3K7CLP57077 242 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 YWHAZP63104 245 aaKnown RBP11.93□□□□□ -0.5
LINC01278-204ENST00000609143 ROR1Q01973 937 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 ADCY1Q08828 1119 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 SLC25A52Q3SY17 297 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 ANKRD20A8PQ5CZ79 823 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 C6orf118Q5T5N4 469 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 LHX8Q68G74 356 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 ZNF598Q86UK7 904 aaKnown RBP11.93□□□□□ -0.5
LINC01278-204ENST00000609143 RELL1Q8IUW5 271 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 DEFB106AQ8N104 65 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 PGM2Q96G03 612 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 PCED1BQ96HM7 432 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 RGS18Q9NS28 235 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 STAP1Q9ULZ2 295 aa11.93□□□□□ -0.5
LINC01278-204ENST00000609143 NOVA2Q9UNW9 492 aaKnown RBP11.93□□□□□ -0.5
LINC01278-204ENST00000609143 MYBPHLA2RUH7 354 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 ERICH4A6NGS2 130 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 ACSL3O95573 720 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 HPDP32754 393 aaPredicted RBP11.92□□□□□ -0.5
LINC01278-204ENST00000609143 ACTN2P35609 894 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 SULT1E1P49888 294 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 TKTL1P51854 596 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 PRMT2P55345 433 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 DPYSL2Q16555 572 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 PPP6R3Q5H9R7 873 aaPredicted RBP11.92□□□□□ -0.5
LINC01278-204ENST00000609143 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 UHMK1Q8TAS1 419 aaKnown RBP11.92□□□□□ -0.5
LINC01278-204ENST00000609143 SMARCD1Q96GM5 515 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 ROPN1BQ9BZX4 212 aaPredicted RBP11.92□□□□□ -0.5
LINC01278-204ENST00000609143 STMN4Q9H169 189 aaPredicted RBP11.92□□□□□ -0.5
LINC01278-204ENST00000609143 ROPN1Q9HAT0 212 aaPredicted RBP11.92□□□□□ -0.5
LINC01278-204ENST00000609143 DNAJC17Q9NVM6 304 aaKnown RBP11.92□□□□□ -0.5
LINC01278-204ENST00000609143 AP4E1Q9UPM8 1137 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 TLDC2A0PJX2 215 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 INPPL1O15357 1258 aa11.92□□□□□ -0.5
LINC01278-204ENST00000609143 RGS16O15492 202 aaPredicted RBP11.92□□□□□ -0.5
LINC01278-204ENST00000609143 FKTNO75072 461 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms