RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 IGHV1OR15-9A0A0B4J2B8 117 aa18.43■□□□□ 0.54
CHMP4A-211ENST00000609024 CD59P13987 128 aa18.43■□□□□ 0.54
CHMP4A-211ENST00000609024 PTPN1P18031 435 aaKnown RBP18.43■□□□□ 0.54
CHMP4A-211ENST00000609024 PDZD3Q86UT5 571 aa18.43■□□□□ 0.54
CHMP4A-211ENST00000609024 NAXDQ8IW45 347 aa18.43■□□□□ 0.54
CHMP4A-211ENST00000609024 OR5B17Q8NGF7 314 aa18.43■□□□□ 0.54
CHMP4A-211ENST00000609024 OVCA2Q8WZ82 227 aa18.43■□□□□ 0.54
CHMP4A-211ENST00000609024 MED10Q9BTT4 135 aa18.43■□□□□ 0.54
CHMP4A-211ENST00000609024 SPHK2Q9NRA0 654 aa18.43■□□□□ 0.54
CHMP4A-211ENST00000609024 PANK4Q9NVE7 773 aa18.43■□□□□ 0.54
CHMP4A-211ENST00000609024 CACNA1EQ15878 2313 aa18.43■□□□□ 0.54
CHMP4A-211ENST00000609024 A8MXQ7 604 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 HOXC11O43248 304 aaPredicted RBP18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 COCHO43405 550 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 FTH1P19P0C7X4 201 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 IRF1P10914 325 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 TNNI1P19237 187 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 CASP5P51878 434 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 RABEP1Q15276 862 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 WDR49Q8IV35 697 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 ADAMTS14Q8WXS8 1223 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 CAMK1GQ96NX5 476 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 MRPL45Q9BRJ2 306 aaKnown RBP18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 KIAA1586Q9HCI6 787 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 DNAJC17Q9NVM6 304 aaKnown RBP18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 CHORDC1Q9UHD1 332 aaPredicted RBP18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 GPSM3Q9Y4H4 160 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 MYOFQ9NZM1 2061 aa18.42■□□□□ 0.54
CHMP4A-211ENST00000609024 MEI4A8MW99 385 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 TACC1O75410 805 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 DLATP10515 647 aaKnown RBP18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 STAT6P42226 847 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 GOLGA8FQ08AF8 430 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 GOLGA8DPQ0D2H9 430 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 TRPC3Q13507 836 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 WDR72Q3MJ13 1102 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 KIAA1324Q6UXG2 1013 aaKnown RBP18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 CCDC73Q6ZRK6 1079 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 TRAPPC11Q7Z392 1133 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 LIMS2Q7Z4I7 341 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 BBS7Q8IWZ6 715 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 ETFBKMTQ8IXQ9 262 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 CCDC65Q8IXS2 484 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 PHTF2Q8N3S3 785 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 PNPLA1Q8N8W4 532 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 IPO4Q8TEX9 1081 aaKnown RBP18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 SETD7Q8WTS6 366 aaKnown RBP18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 DNAJC19Q96DA6 116 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 ERLEC1Q96DZ1 483 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 ZDHHC5Q9C0B5 715 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 ZNF518BQ9C0D4 1074 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 PPP4R2Q9NY27 417 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 ADAMTS20P59510 1910 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 DMXL2Q8TDJ6 3036 aa18.41■□□□□ 0.54
CHMP4A-211ENST00000609024 FAM163BP0C2L3 166 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 NDUFV2P19404 249 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 COL28A1Q2UY09 1125 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 EGFLAMQ63HQ2 1017 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 TMEM25Q86YD3 366 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 CBWD2Q8IUF1 395 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 SLC41A1Q8IVJ1 513 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 B3GALNT2Q8NCR0 500 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 TMX3Q96JJ7 454 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 KIF2CQ99661 725 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 BBS2Q9BXC9 721 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.4■□□□□ 0.548e-7■■■■■ 140.3
CHMP4A-211ENST00000609024 LSM7Q9UK45 103 aaKnown RBP18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 STARD13Q9Y3M8 1113 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 PTPRJQ12913 1337 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 WDFY3Q8IZQ1 3526 aa18.4■□□□□ 0.54
CHMP4A-211ENST00000609024 NBEAQ8NFP9 2946 aa18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 NEDD8-MDP1E9PL57 170 aa18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 CLDN5O00501 218 aa18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 CHRM1P11229 460 aaPredicted RBP18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 TUBP50607 506 aa18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 STARD3Q14849 445 aa18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 USP49Q70CQ1 688 aa18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 RDH13Q8NBN7 331 aa18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 HNRNPLLQ8WVV9 542 aaKnown RBP18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 ZNF419Q96HQ0 510 aaPredicted RBP18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 MIR1-1HGQ9H1L0 117 aa18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 DPEP3Q9H4B8 488 aa18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 CCSER2Q9H7U1 834 aa18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 HSPBP1Q9NZL4 362 aa18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 WDR35Q9P2L0 1181 aa18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 NXF1Q9UBU9 619 aaKnown RBP18.39■□□□□ 0.53
CHMP4A-211ENST00000609024 MYO18AQ92614 2054 aaKnown RBP18.38■□□□□ 0.53
CHMP4A-211ENST00000609024 A0A1W2PQF6 199 aa18.38■□□□□ 0.53
CHMP4A-211ENST00000609024 PHACTR2O75167 634 aa18.38■□□□□ 0.53
CHMP4A-211ENST00000609024 CACNA2D1P54289 1103 aa18.38■□□□□ 0.53
CHMP4A-211ENST00000609024 CCNI2Q6ZMN8 369 aaPredicted RBP18.38■□□□□ 0.53
CHMP4A-211ENST00000609024 B3GNT5Q9BYG0 378 aa18.38■□□□□ 0.53
CHMP4A-211ENST00000609024 PCDH15Q96QU1 1955 aa18.37■□□□□ 0.53
CHMP4A-211ENST00000609024 A0A1B0GTW7 788 aa18.37■□□□□ 0.53
CHMP4A-211ENST00000609024 VPS37CA5D8V6 355 aaPredicted RBP18.37■□□□□ 0.53
CHMP4A-211ENST00000609024 TYRP14679 529 aa18.37■□□□□ 0.53
CHMP4A-211ENST00000609024 MAOBP27338 520 aa18.37■□□□□ 0.53
CHMP4A-211ENST00000609024 CD6P30203 668 aa18.37■□□□□ 0.53
CHMP4A-211ENST00000609024 GRIK2Q13002 908 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms