RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 TTC7BQ86TV6 843 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 MIB1Q86YT6 1006 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 CCDC36Q8IYA8 594 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 GALNT11Q8NCW6 608 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 FLAD1Q8NFF5 587 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 IL17RDQ8NFM7 739 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 SLC39A13Q96H72 371 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 SERPINB12Q96P63 405 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 DEPDC7Q96QD5 511 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 SEC22CQ9BRL7 303 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 SLC4A5Q9BY07 1137 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 FRMD8Q9BZ67 464 aaPredicted RBP4.9□□□□□ -1.62
HDDC2-208ENST00000609021 BRINP2Q9C0B6 783 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 ZCCHC2Q9C0B9 1178 aaKnown RBP4.9□□□□□ -1.62
HDDC2-208ENST00000609021 TMEM168Q9H0V1 697 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 TP63Q9H3D4 680 aaPredicted RBP4.9□□□□□ -1.62
HDDC2-208ENST00000609021 SNRKQ9NRH2 765 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 HOMER2Q9NSB8 354 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 FGFR1OP2Q9NVK5 253 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 HSPBP1Q9NZL4 362 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 STK17AQ9UEE5 414 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 DAPK2Q9UIK4 370 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 TTC21BQ7Z4L5 1316 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 DCCP43146 1447 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 A6NJY4 79 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 CCDC85CA6NKD9 419 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 hCG_2039718K7EN88 272 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 GALR2O43603 387 aaPredicted RBP4.9□□□□□ -1.62
HDDC2-208ENST00000609021 GAS7O60861 476 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 NR1I2O75469 434 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 KRT1P04264 644 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 APEHP13798 732 aaKnown RBP4.9□□□□□ -1.62
HDDC2-208ENST00000609021 MX2P20592 715 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 GARTP22102 1010 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 CTHP32929 405 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 NUP62P37198 522 aaPredicted RBP4.9□□□□□ -1.62
HDDC2-208ENST00000609021 ENTPD1P49961 510 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 ESRRGP62508 458 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 CAP1Q01518 475 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 SGCGQ13326 291 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 MXD4Q14582 209 aaPredicted RBP4.9□□□□□ -1.62
HDDC2-208ENST00000609021 TLR1Q15399 786 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 GARNL3Q5VVW2 1013 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 KLHDC10Q6PID8 442 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 PODNQ7Z5L7 613 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 TTC6Q86TZ1 520 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 HID1Q8IV36 788 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 ASCC1Q8N9N2 400 aaKnown RBP4.9□□□□□ -1.62
HDDC2-208ENST00000609021 DTX3LQ8TDB6 740 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 AIDAQ96BJ3 306 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 ZDHHC12Q96GR4 267 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 C19orf43Q9BQ61 176 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 EPB41L1Q9H4G0 881 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 NOL6Q9H6R4 1146 aaKnown RBP4.9□□□□□ -1.62
HDDC2-208ENST00000609021 ENAMQ9NRM1 1142 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 FETUBQ9UGM5 382 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 SLC12A6Q9UHW9 1150 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 LRFN2Q9ULH4 789 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 NOVA2Q9UNW9 492 aaKnown RBP4.9□□□□□ -1.62
HDDC2-208ENST00000609021 DERAQ9Y315 318 aa4.9□□□□□ -1.62
HDDC2-208ENST00000609021 USP15Q9Y4E8 981 aaPredicted RBP4.9□□□□□ -1.62
HDDC2-208ENST00000609021 USP6P35125 1406 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 SLC12A8A0AV02 714 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 C19orf67A6NJJ6 358 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 ZNF98A6NK75 572 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 ZNF839A8K0R7 811 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 KCNJ18B7U540 433 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 F8W8V4 182 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 USP1O94782 785 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 URODP06132 367 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 RARAP10276 462 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 PDE6AP16499 860 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 ARF4P18085 180 aaPredicted RBP4.9□□□□□ -1.63
HDDC2-208ENST00000609021 SHMT1P34896 483 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 DIO1P49895 249 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 ARSDP51689 593 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 NEK3P51956 506 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 ERVK-21P61565 698 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 ALDH6A1Q02252 535 aaKnown RBP4.9□□□□□ -1.63
HDDC2-208ENST00000609021 PUDPQ08623 228 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 ITGADQ13349 1161 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 KCNJ12Q14500 433 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 SSPNQ14714 243 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 PARP6Q2NL67 630 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 ZNF829Q3KNS6 432 aaPredicted RBP4.9□□□□□ -1.63
HDDC2-208ENST00000609021 RESP18Q5W5W9 173 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 IQSEC1Q6DN90 963 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 OR7E24Q6IFN5 339 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 STYK1Q6J9G0 422 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 LARP1Q6PKG0 1096 aaKnown RBP4.9□□□□□ -1.63
HDDC2-208ENST00000609021 TRAF7Q6Q0C0 670 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 PRR23BQ6ZRT6 265 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 ERI1Q8IV48 349 aaKnown RBP4.9□□□□□ -1.63
HDDC2-208ENST00000609021 P3H2Q8IVL5 708 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 AENQ8WTP8 325 aaKnown RBP4.9□□□□□ -1.63
HDDC2-208ENST00000609021 GTF3C2Q8WUA4 911 aaPredicted RBP4.9□□□□□ -1.63
HDDC2-208ENST00000609021 HEXDCQ8WVB3 486 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 TANKQ92844 425 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 ZNF285Q96NJ3 590 aa4.9□□□□□ -1.63
HDDC2-208ENST00000609021 OPALINQ96PE5 141 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms