RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 DHPSP49366 369 aaPredicted RBP14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 NDST1P52848 882 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 KDSRQ06136 332 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 ORC1Q13415 861 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 PKP1Q13835 747 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 CRYBG2Q8N1P7 616 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 SPRYD3Q8NCJ5 442 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 ZMIZ2Q8NF64 920 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 OLIG1Q8TAK6 271 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 RLN3Q8WXF3 142 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 OTUB2Q96DC9 234 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 SMARCD1Q96GM5 515 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 SMOQ99835 787 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 KCTD10Q9H3F6 313 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 POLMQ9NP87 494 aaPredicted RBP14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 GMIPQ9P107 970 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 ANGPTL2Q9UKU9 493 aa14.18□□□□□ -0.14
POLR2J3-219ENST00000608621 TBC1D3BA6NDS4 549 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 PATE3B3GLJ2 98 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 KHNYNO15037 678 aaKnown RBP14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 RPN1P04843 607 aaKnown RBP14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 ZDHHC11BP0C7U3 371 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 IRF1P10914 325 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 P4HA1P13674 534 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 PMLP29590 882 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 PGFP49763 221 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 MAP3K7CLP57077 242 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 ST3GAL2Q16842 350 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 ZACNQ401N2 412 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 HSF5Q4G112 596 aaPredicted RBP14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 EOGTQ5NDL2 527 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 BTBD8Q5XKL5 378 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 SPOPLQ6IQ16 392 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 SV2AQ7L0J3 742 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 CYP2U1Q7Z449 544 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 TMEM25Q86YD3 366 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 HSCBQ8IWL3 235 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 BBS7Q8IWZ6 715 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 PHTF2Q8N3S3 785 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 FRMD1Q8N878 549 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 C12orf29Q8N999 325 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 SLC2A14Q8TDB8 520 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 TMC2Q8TDI7 906 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 TMEM174Q8WUU8 243 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 KRT82Q9NSB4 513 aa14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 CIZ1Q9ULV3 898 aaPredicted RBP14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 KMT2BQ9UMN6 2715 aaPredicted RBP14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 MAP1BP46821 2468 aaKnown RBP14.17□□□□□ -0.14
POLR2J3-219ENST00000608621 MYH10P35580 1976 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 A0A1B0GVL5 298 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 LNP1A1A4G5 178 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 MAP3K13O43283 966 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 ADAM23O75077 832 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 TULP3O75386 442 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 TBX18O95935 607 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 NR3C1P04150 777 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 P2RY2P41231 377 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 TUBP50607 506 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 IRX4P78413 519 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 ANO4Q32M45 955 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 C1orf220Q5T0J3 134 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 CEP135Q66GS9 1140 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 UNC93AQ86WB7 457 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 ETFBKMTQ8IXQ9 262 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 PGBD3Q8N328 593 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 PIGKQ92643 395 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 TAF4BQ92750 862 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 NACA2Q9H009 215 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 FBXO44Q9H4M3 255 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 CSNK1G1Q9HCP0 422 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 SPHK2Q9NRA0 654 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 FAM49BQ9NUQ9 324 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 BCCIPQ9P287 314 aaKnown RBP eCLIP14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 DEC1Q9P2X7 70 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 HMGXB4Q9UGU5 601 aa14.16□□□□□ -0.14
POLR2J3-219ENST00000608621 GON4LQ3T8J9 2241 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 IKBKBO14920 756 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 TRIM24O15164 1050 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 HOXC11O43248 304 aaPredicted RBP14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 TLR5O60602 858 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 ASS1P00966 412 aaKnown RBP14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 HLA-DRAP01903 254 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 ADORA2BP29275 332 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 PREPLQ4J6C6 727 aaPredicted RBP14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 DAB2IPQ5VWQ8 1189 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 PSAPL1Q6NUJ1 521 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 NUDT18Q6ZVK8 323 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 HTR3DQ70Z44 454 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 TMEFF1Q8IYR6 380 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 WHAMMQ8TF30 809 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 HMGB4Q8WW32 186 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 DUSP9Q99956 384 aaKnown RBP14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 KLF16Q9BXK1 252 aaPredicted RBP14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 TLR8Q9NR97 1041 aaKnown RBP14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 MBD1Q9UIS9 605 aaPredicted RBP14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 FRMD4BQ9Y2L6 1034 aa14.15□□□□□ -0.14
POLR2J3-219ENST00000608621 TCRBV21S2A2A0A5A6 115 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms