RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 TRIM49CP0CI26 452 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 CSH1P0DML2 217 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 CSH2P0DML3 217 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 GNL1P36915 607 aaPredicted RBP20.42■□□□□ 0.86
SGMS1-208ENST00000608287 NLRP12P59046 1061 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 PSMC1P62191 440 aaKnown RBP20.42■□□□□ 0.86
SGMS1-208ENST00000608287 ZACNQ401N2 412 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 HSF5Q4G112 596 aaPredicted RBP20.42■□□□□ 0.86
SGMS1-208ENST00000608287 ZNF667Q5HYK9 610 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 C1orf220Q5T0J3 134 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 SV2AQ7L0J3 742 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 MON1AQ86VX9 555 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 SPATA2LQ8IUW3 424 aaPredicted RBP20.42■□□□□ 0.86
SGMS1-208ENST00000608287 OR6B3Q8NGW1 331 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 ELMO3Q96BJ8 720 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 PKMYT1Q99640 499 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 MMRN2Q9H8L6 949 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 MMP17Q9ULZ9 603 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 INVSQ9Y283 1065 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 CACNA1EQ15878 2313 aa20.42■□□□□ 0.86
SGMS1-208ENST00000608287 DMXL2Q8TDJ6 3036 aa20.41■□□□□ 0.86
SGMS1-208ENST00000608287 EPB41P11171 864 aaKnown RBP20.41■□□□□ 0.86
SGMS1-208ENST00000608287 BCKDHBP21953 392 aa20.41■□□□□ 0.86
SGMS1-208ENST00000608287 CYP2F1P24903 491 aa20.41■□□□□ 0.86
SGMS1-208ENST00000608287 PIK3CAP42336 1068 aa20.41■□□□□ 0.86
SGMS1-208ENST00000608287 GFPT1Q06210 699 aaPredicted RBP20.41■□□□□ 0.86
SGMS1-208ENST00000608287 SGSM1Q2NKQ1 1148 aa20.41■□□□□ 0.86
SGMS1-208ENST00000608287 LYSMD4Q5XG99 296 aa20.41■□□□□ 0.86
SGMS1-208ENST00000608287 ANKRD40Q6AI12 368 aa20.41■□□□□ 0.86
SGMS1-208ENST00000608287 SCARA5Q6ZMJ2 495 aa20.41■□□□□ 0.86
SGMS1-208ENST00000608287 USP33Q8TEY7 942 aa20.41■□□□□ 0.86
SGMS1-208ENST00000608287 CCDC86Q9H6F5 360 aaKnown RBP20.41■□□□□ 0.86
SGMS1-208ENST00000608287 VRTNQ9H8Y1 702 aa20.41■□□□□ 0.86
SGMS1-208ENST00000608287 ABCB6Q9NP58 842 aa20.41■□□□□ 0.86
SGMS1-208ENST00000608287 POLMQ9NP87 494 aaPredicted RBP20.41■□□□□ 0.86
SGMS1-208ENST00000608287 GCN1Q92616 2671 aaKnown RBP20.4■□□□□ 0.86
SGMS1-208ENST00000608287 TRIM49BA6NDI0 452 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 BIN1O00499 593 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 PSMA7O14818 248 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 NFATC1O95644 943 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 HLA-DRAP01903 254 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 F11P03951 625 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 FAM163BP0C2L3 166 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 GCLMP48507 274 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 PDE6CP51160 858 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 PMS1P54277 932 aaKnown RBP20.4■□□□□ 0.86
SGMS1-208ENST00000608287 MRPS21P82921 87 aaKnown RBP20.4■□□□□ 0.86
SGMS1-208ENST00000608287 CRY1Q16526 586 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 FAM171BQ6P995 826 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 C4orf50Q6ZRC1 276 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 RAB44Q7Z6P3 723 aaPredicted RBP20.4■□□□□ 0.86
SGMS1-208ENST00000608287 MDGA1Q8NFP4 955 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 OLIG1Q8TAK6 271 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 SMYD3Q9H7B4 428 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 SLC6A14Q9UN76 642 aa20.4■□□□□ 0.86
SGMS1-208ENST00000608287 OBSL1O75147 1896 aa20.39■□□□□ 0.86
SGMS1-208ENST00000608287 A8MXQ7 604 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 USP17L7P0C7H9 530 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 P4HA1P13674 534 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 P2RY2P41231 377 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 PPP1R2P41236 205 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 GPR15P49685 360 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 CDH8P55286 799 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 RPL10AP62906 217 aaKnown RBP20.39■□□□□ 0.85
SGMS1-208ENST00000608287 CYP27A1Q02318 531 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 LRRC63Q05C16 580 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 ENPEPQ07075 957 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 PPP3CAQ08209 521 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 SCAPQ12770 1279 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 MAPRE1Q15691 268 aaKnown RBP20.39■□□□□ 0.85
SGMS1-208ENST00000608287 DDR2Q16832 855 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 DUOXA1Q1HG43 343 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 CFAP221Q4G0U5 840 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 SDHAF4Q5VUM1 108 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 TXNDC8Q6A555 127 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 CHCHD4Q8N4Q1 142 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 MYLPFQ96A32 169 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 DHTKD1Q96HY7 919 aaPredicted RBP20.39■□□□□ 0.85
SGMS1-208ENST00000608287 FUBP3Q96I24 572 aaKnown RBP eCLIP20.39■□□□□ 0.85
SGMS1-208ENST00000608287 CRTAC1Q9NQ79 661 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.39■□□□□ 0.851e-6■■■■■ 59.8
SGMS1-208ENST00000608287 MAGEC2Q9UBF1 373 aaPredicted RBP20.39■□□□□ 0.85
SGMS1-208ENST00000608287 NME7Q9Y5B8 376 aa20.39■□□□□ 0.85
SGMS1-208ENST00000608287 TNRC6BQ9UPQ9 1833 aaKnown RBP20.39■□□□□ 0.85
SGMS1-208ENST00000608287 PLXND1Q9Y4D7 1925 aa20.38■□□□□ 0.85
SGMS1-208ENST00000608287 TRAV19A0A0A6YYK7 116 aa20.38■□□□□ 0.85
SGMS1-208ENST00000608287 AP5Z1O43299 807 aa20.38■□□□□ 0.85
SGMS1-208ENST00000608287 CFIP05156 583 aa20.38■□□□□ 0.85
SGMS1-208ENST00000608287 CD44P16070 742 aaKnown RBP20.38■□□□□ 0.85
SGMS1-208ENST00000608287 FKBP3Q00688 224 aaKnown RBP20.38■□□□□ 0.85
SGMS1-208ENST00000608287 MORC3Q14149 939 aa20.38■□□□□ 0.85
SGMS1-208ENST00000608287 CAMK4Q16566 473 aa20.38■□□□□ 0.85
SGMS1-208ENST00000608287 COL28A1Q2UY09 1125 aa20.38■□□□□ 0.85
SGMS1-208ENST00000608287 C2orf27AQ580R0 203 aa20.38■□□□□ 0.85
SGMS1-208ENST00000608287 MDH1BQ5I0G3 518 aa20.38■□□□□ 0.85
SGMS1-208ENST00000608287 PEAR1Q5VY43 1037 aaPredicted RBP20.38■□□□□ 0.85
SGMS1-208ENST00000608287 KLHL10Q6JEL2 608 aa20.38■□□□□ 0.85
SGMS1-208ENST00000608287 C19orf48Q6RUI8 117 aa20.38■□□□□ 0.85
SGMS1-208ENST00000608287 TTC30AQ86WT1 665 aa20.38■□□□□ 0.85
SGMS1-208ENST00000608287 SCN4BQ8IWT1 228 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms