RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 MARSP56192 900 aaKnown RBP14.13□□□□□ -0.15
CTSA-213ENST00000606782 PPP3CAQ08209 521 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 SRSF5Q13243 272 aaKnown RBP14.13□□□□□ -0.15
CTSA-213ENST00000606782 NCAPHQ15003 741 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 IQCB1Q15051 598 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 RSPO4Q2I0M5 234 aaPredicted RBP14.13□□□□□ -0.15
CTSA-213ENST00000606782 HEATR6Q6AI08 1181 aaKnown RBP14.13□□□□□ -0.15
CTSA-213ENST00000606782 SCARA5Q6ZMJ2 495 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 FAM186BQ8IYM0 893 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 SCAMP5Q8TAC9 235 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 GAB3Q8WWW8 586 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 FBXO32Q969P5 355 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 FAXDC2Q96IV6 333 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 ZFRQ96KR1 1074 aaKnown RBP14.13□□□□□ -0.15
CTSA-213ENST00000606782 SMOQ99835 787 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 SLC8A2Q9UPR5 921 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 E2F8A0AVK6 867 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 COCHO43405 550 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 AP1G2O75843 785 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 BEST1O76090 585 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 CYP17A1P05093 508 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 EPB41P11171 864 aaKnown RBP14.12□□□□□ -0.15
CTSA-213ENST00000606782 EIF2DP41214 584 aaKnown RBP14.12□□□□□ -0.15
CTSA-213ENST00000606782 ZNF165P49910 485 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 SLC5A3P53794 718 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 LPAL2Q16609 132 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 HECTD3Q5T447 861 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 SPOPLQ6IQ16 392 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 PRR23BQ6ZRT6 265 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 DHX40Q8IX18 779 aaKnown RBP14.12□□□□□ -0.15
CTSA-213ENST00000606782 SLC2A14Q8TDB8 520 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 ACDQ96AP0 544 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 OTUB2Q96DC9 234 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 LOXL4Q96JB6 756 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 HNRNPABQ99729 332 aaKnown RBP14.12□□□□□ -0.15
CTSA-213ENST00000606782 ANP32EQ9BTT0 268 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 MED10Q9BTT4 135 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 THAP9Q9H5L6 903 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 APOBEC3GQ9HC16 384 aaKnown RBP14.12□□□□□ -0.15
CTSA-213ENST00000606782 METTL14Q9HCE5 456 aaKnown RBP14.12□□□□□ -0.15
CTSA-213ENST00000606782 SAMSN1Q9NSI8 373 aaKnown RBP14.12□□□□□ -0.15
CTSA-213ENST00000606782 TBC1D14Q9P2M4 693 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 HMGXB4Q9UGU5 601 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 EBF1Q9UH73 591 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 CHORDC1Q9UHD1 332 aaPredicted RBP14.12□□□□□ -0.15
CTSA-213ENST00000606782 DNAH14Q0VDD8 3507 aa14.12□□□□□ -0.15
CTSA-213ENST00000606782 SMTNL1A8MU46 457 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 K7EQS6 105 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 ABL1P00519 1130 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 MBL2P11226 248 aaPredicted RBP14.11□□□□□ -0.15
CTSA-213ENST00000606782 CHRM1P11229 460 aaPredicted RBP14.11□□□□□ -0.15
CTSA-213ENST00000606782 KRT13P13646 458 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 PIK3CAP42336 1068 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 GCLMP48507 274 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 MYL5Q02045 173 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 SPEM2Q0P670 501 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 DHCR24Q15392 516 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 CSRP2Q16527 193 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 TPD52L1Q16890 204 aaPredicted RBP14.11□□□□□ -0.15
CTSA-213ENST00000606782 RHBDF2Q6PJF5 856 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 DGLUCYQ7Z3D6 616 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 FAM160A2Q8N612 972 aaPredicted RBP14.11□□□□□ -0.15
CTSA-213ENST00000606782 C12orf29Q8N999 325 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 RPLP0P6Q8NHW5 317 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 TAS1R2Q8TE23 839 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 USP33Q8TEY7 942 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 WHAMMQ8TF30 809 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 ZC3H10Q96K80 434 aaKnown RBP14.11□□□□□ -0.15
CTSA-213ENST00000606782 NIF3L1Q9GZT8 377 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 FBXO44Q9H4M3 255 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 FAM124BQ9H5Z6 455 aaPredicted RBP14.11□□□□□ -0.15
CTSA-213ENST00000606782 CBX8Q9HC52 389 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 TMEM8AQ9HCN3 771 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 PNPLA8Q9NP80 782 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 KRT82Q9NSB4 513 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 FANCLQ9NW38 375 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 SMPD4Q9NXE4 827 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 CFAP97Q9P2B7 532 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 NFE2L3Q9Y4A8 694 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 MYO16Q9Y6X6 1858 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 CNOT1A5YKK6 2376 aaKnown RBP14.11□□□□□ -0.15
CTSA-213ENST00000606782 KIAA1549LQ6ZVL6 1849 aa14.11□□□□□ -0.15
CTSA-213ENST00000606782 MYOFQ9NZM1 2061 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 HHLA1C9JL84 531 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 FOXD2O60548 495 aaPredicted RBP14.1□□□□□ -0.15
CTSA-213ENST00000606782 CILPO75339 1184 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 RPP40O75818 363 aaKnown RBP14.1□□□□□ -0.15
CTSA-213ENST00000606782 TRIM49P0CI25 452 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 TRIM49CP0CI26 452 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 CCDC130P13994 396 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 ATXN1P54253 815 aaKnown RBP14.1□□□□□ -0.15
CTSA-213ENST00000606782 CDKAL1Q5VV42 579 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 KRT39Q6A163 491 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 CEP68Q76N32 757 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 CACNA2D4Q7Z3S7 1137 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 TRIM59Q8IWR1 403 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 TTC16Q8NEE8 873 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 TWNKQ96RR1 684 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 NT5C1AQ9BXI3 368 aa14.1□□□□□ -0.15
CTSA-213ENST00000606782 IMPG2Q9BZV3 1241 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms