RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 RASAL2Q9UJF2 1139 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 MINPP1Q9UNW1 487 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CHKBQ9Y259 395 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 NUMBLQ9Y6R0 609 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 LAMB4A4D0S4 1761 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 MYH3P11055 1940 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 ROBO2Q9HCK4 1378 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 PHRF1Q9P1Y6 1649 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ACEP12821 1306 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 RPTORQ8N122 1335 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TMEM120BA0PK00 339 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TRIM43BA6NCK2 446 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 LRRC53A6NM62 1247 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 EYA2O00167 538 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 NDC80O14777 642 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 CAPN9O14815 690 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 VILLO15195 856 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 P4HA2O15460 535 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TTI1O43156 1089 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 HNRNPRO43390 633 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 DENRO43583 198 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 BUB1O43683 1085 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TLR2O60603 784 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 EDF1O60869 148 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ENTPD5O75356 428 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 KRT38O76015 456 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 NOL4O94818 638 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZNF205O95201 554 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TGDSO95455 350 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TTLL1O95922 423 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 GAS8O95995 478 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZBED1O96006 694 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 HNRNPCP07910 306 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 GSTM1P09488 218 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 CALM1P0DP23 149 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 CALM2P0DP24 149 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 CALM3P0DP25 149 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 UQCRBP14927 111 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ALOX15P16050 662 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 PAX3P23760 479 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 CASP1P29466 404 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 GUCY1A2P33402 732 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ADD2P35612 726 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TCF7P36402 384 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TRPC1P48995 793 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLURP1P55000 103 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 MTTPP55157 894 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 IRX4P78413 519 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 FOXO4P98177 505 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 NFKB2Q00653 900 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 CAV1Q03135 178 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 RELAQ04206 551 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 PPATQ06203 517 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 GFPT1Q06210 699 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ADCY1Q08828 1119 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TBL3Q12788 808 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ASPHQ12797 758 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ORC2Q13416 577 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 PRPF4BQ13523 1007 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 RAPGEF1Q13905 1077 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 NPY5RQ15761 445 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 IL17AQ16552 155 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 NDUFA5Q16718 116 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 NAALADL2Q58DX5 795 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ACSBG2Q5FVE4 666 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 FAM83BQ5T0W9 1011 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 DEPDC1Q5TB30 811 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 HLA-DQA1Q5Y7H0 255 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 THOC7Q6I9Y2 204 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 DUS1LQ6P1R4 473 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 GGT6Q6P531 493 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 C1orf228Q6PIY5 440 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 PACS1Q6VY07 963 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 GK5Q6ZS86 529 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 OTUD6AQ7L8S5 288 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 IRF2BP2Q7Z5L9 587 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 NET1Q7Z628 596 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TDRPQ86YL5 185 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TMEM126BQ8IUX1 230 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 LRRC49Q8IUZ0 686 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ERI1Q8IV48 349 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 MAP7D3Q8IWC1 876 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 IQCF2Q8IXL9 164 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZC3H3Q8IXZ2 948 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLC17A8Q8NDX2 589 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TTC8Q8TAM2 541 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 DEPTORQ8TB45 409 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 MORC4Q8TE76 937 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 SCFD1Q8WVM8 642 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 C10orf82Q8WW14 230 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 CTNNBL1Q8WYA6 563 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ARHGEF2Q92974 986 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 PTCD3Q96EY7 689 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ABHD8Q96I13 439 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 PRICKLE1Q96MT3 831 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLC6A18Q96N87 628 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 FNBP1Q96RU3 617 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ECSITQ9BQ95 431 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 HGH1Q9BTY7 390 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms