RNA–Protein interactions for RNA: ENST00000605383.1

CTHRC1P1-201, Transcript of collagen triple helix repeat containing 1 pseudogene 1, humanhuman

BASIC

Gene CTHRC1P1, Length 469 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1P1-201ENST00000605383 PPP2R5AQ15172 486 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 RABEP1Q15276 862 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 CNGA2Q16280 664 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ST3GAL2Q16842 350 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 PTCHD3Q3KNS1 767 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 CC2D1BQ5T0F9 858 aaKnown RBP3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 FAM102BQ5T8I3 360 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 SHC4Q6S5L8 630 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 DCDC5Q6ZRR9 648 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 OR56A3Q8NH54 315 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 RUNDC1Q96C34 613 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 NMD3Q96D46 503 aaKnown RBP3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ZNF48Q96MX3 618 aaPredicted RBP3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 SMURF2Q9HAU4 748 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ZNF287Q9HBT7 754 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 GOLGA6AQ9NYA3 693 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 KLHL13Q9P2N7 655 aa3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 NKX1-2Q9UD57 310 aaPredicted RBP3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 NOB1Q9ULX3 412 aaKnown RBP3.56□□□□□ -1.84
CTHRC1P1-201ENST00000605383 RAB27BO00194 218 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 RRP9O43818 475 aaKnown RBP3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 USP12O75317 370 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ATP5F1P24539 256 aaPredicted RBP3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ACVR2AP27037 513 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 CPT1AP50416 773 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 GATMP50440 423 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ITGA8P53708 1063 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 TIRAPP58753 221 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 TIAL1Q01085 375 aaKnown RBP eCLIP3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 LMAN2Q12907 356 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 STK3Q13188 491 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 KCNB1Q14721 858 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 LARS2Q15031 903 aaKnown RBP3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 POLD3Q15054 466 aaPredicted RBP3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 KLHL22Q53GT1 634 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 NXNQ6DKJ4 435 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 DARS2Q6PI48 645 aaKnown RBP3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 CCDC149Q6ZUS6 474 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 SRGAP1Q7Z6B7 1085 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 SKAP1Q86WV1 359 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 KIAA0319LQ8IZA0 1049 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 SDR16C5Q8N3Y7 309 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 LRTOMTQ8WZ04 291 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 C22orf23Q9BZE7 217 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ATP6V0A4Q9HBG4 840 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 DNMT3BQ9UBC3 853 aaKnown RBP3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 CPNE7Q9UBL6 633 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 STEAP1Q9UHE8 339 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ITGB1BP2Q9UKP3 347 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 L1RE1Q9UN81 338 aa3.55□□□□□ -1.84
CTHRC1P1-201ENST00000605383 TCRBV5S1A1TA0A578 114 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 A8MVJ9 347 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 H7C4K7 107 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 EXOC5O00471 708 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 MAP4K4O95819 1239 aaPredicted RBP3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 RPL17P18621 184 aaKnown RBP3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 NR4A2P43354 598 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 DIO1P49895 249 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 FAM193AP78312 1265 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 TXNL4AP83876 142 aaKnown RBP3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 PSG6Q00889 435 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ID2Q02363 134 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 LRRC41Q15345 812 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 PFKFB3Q16875 520 aaPredicted RBP3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ZNF260Q3ZCT1 412 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 Q4G0T1 1027 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 MEX3CQ5U5Q3 659 aaKnown RBP3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 RNF220Q5VTB9 566 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 APOA5Q6Q788 366 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ZDHHC24Q6UX98 284 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 MICU3Q86XE3 530 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 TCEAL8Q8IYN2 117 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 C16orf52Q8NHV5 167 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 MAFAQ8NHW3 353 aaPredicted RBP3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 SPATA3Q8NHX4 192 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 MAML1Q92585 1016 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 HIC2Q96JB3 615 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ADGRE3Q9BY15 652 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 SPRTNQ9H040 489 aaPredicted RBP3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 CACNA1IQ9P0X4 2223 aa3.54□□□□□ -1.84
CTHRC1P1-201ENST00000605383 USP19O94966 1318 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 GOLIM4O00461 696 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 FCHO1O14526 889 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 SCGB1D2O95969 90 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 SNHG28P0DPA3 235 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 APEHP13798 732 aaKnown RBP3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 HGFP14210 728 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 SFPQP23246 707 aaKnown RBP eCLIP3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ADRA1DP25100 572 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 TACR3P29371 465 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 RPS16P62249 146 aaKnown RBP3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 RPS13P62277 151 aaKnown RBP3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 CFHR3Q02985 330 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ZNF91Q05481 1191 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 FHL1Q13642 323 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 TWIST1Q15672 202 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 KIAA0753Q2KHM9 967 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 ZNF750Q32MQ0 723 aa3.53□□□□□ -1.84
CTHRC1P1-201ENST00000605383 RANBP10Q6VN20 620 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms