RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 LIMCH1Q9UPQ0 1083 aa12.54□□□□□ -0.4
PDLIM1P1-201ENST00000604187 FNDC3AQ9Y2H6 1198 aaKnown RBP12.54□□□□□ -0.4
PDLIM1P1-201ENST00000604187 RAD54BQ9Y620 910 aa12.54□□□□□ -0.4
PDLIM1P1-201ENST00000604187 A0A1B0GTW7 788 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 FAM149AA5PLN7 773 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 CILPO75339 1184 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 PDGFRBP09619 1106 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 DDIT3P35638 169 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 ABCG1P45844 678 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 POSTNQ15063 836 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 MDH1BQ5I0G3 518 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 TDRD10Q5VZ19 366 aaKnown RBP12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 GRAMD4Q6IC98 578 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 SDE2Q6IQ49 451 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 TMEM25Q86YD3 366 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 ZSWIM2Q8NEG5 633 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 RASSF8Q8NHQ8 419 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 BAHD1Q8TBE0 780 aaPredicted RBP12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 SLC39A7Q92504 469 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 OTUB2Q96DC9 234 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 CALML4Q96GE6 196 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 PCED1BQ96HM7 432 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 MRGPRX1Q96LB2 322 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 C8orf48Q96LL4 319 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 GABRG3Q99928 467 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 ST6GALNAC4Q9H4F1 302 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 TM7SF3Q9NS93 570 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 BLOC1S4Q9NUP1 217 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 DNAJC17Q9NVM6 304 aaKnown RBP12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 SH3BP1Q9Y3L3 701 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 STARD13Q9Y3M8 1113 aa12.53□□□□□ -0.4
PDLIM1P1-201ENST00000604187 COCHO43405 550 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 DKK1O94907 266 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CER1O95813 267 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 NCAM1P13591 858 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PLA2G2AP14555 144 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CD6P30203 668 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 MATKP42679 507 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CACNA2D1P54289 1103 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 KCNA1Q09470 495 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 MYO1EQ12965 1108 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CAMK2BQ13554 666 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CCDC157Q569K6 752 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 RILPL1Q5EBL4 403 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SFR1Q86XK3 245 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GALNT15Q8N3T1 639 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 MYCBPAPQ8TBZ2 947 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 NOC3LQ8WTT2 800 aaKnown RBP12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 RAD54LQ92698 747 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TOE1Q96GM8 510 aaKnown RBP12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CDC6Q99741 560 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PDE11AQ9HCR9 933 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SPHK2Q9NRA0 654 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TMEM30AQ9NV96 361 aa12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 R3HCC1Q9Y3T6 440 aaKnown RBP12.52□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TNRC6BQ9UPQ9 1833 aaKnown RBP12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 MYO18BQ8IUG5 2567 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GOLGA8IPA6NC78 632 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GOLGA8JA6NMD2 632 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 NEDD8-MDP1E9PL57 170 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ATXN7O15265 892 aaPredicted RBP12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 FLRT2O43155 660 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TMEM191BP0C7N4 346 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ZNF883P0CG24 379 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 IRF1P10914 325 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 UBA7P41226 1012 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 BNC1Q01954 994 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 HLA-BQ31612 363 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 MCTP1Q6DN14 999 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 DPH6Q7L8W6 267 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 HS2ST1Q7LGA3 356 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ZNF720Q7Z2F6 126 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 LIMS2Q7Z4I7 341 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 RHBDD1Q8TEB9 315 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SCFD1Q8WVM8 642 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 DNASE2BQ8WZ79 361 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 HVCN1Q96D96 273 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 HPDLQ96IR7 371 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GPR174Q9BXC1 333 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ZNF518BQ9C0D4 1074 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 BTBD3Q9Y2F9 522 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 URB1O60287 2271 aaKnown RBP12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 MYO16Q9Y6X6 1858 aa12.51□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SCN1AP35498 2009 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PRRT4C9JH25 899 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TK2O00142 265 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 BCAT2O15382 392 aaPredicted RBP12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SLC26A4O43511 780 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PPP1R37O75864 691 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 WARSP23381 471 aaKnown RBP12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 YWHAQP27348 245 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ITPKBP27987 946 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 HECTD3Q5T447 861 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ARL6IP4Q66PJ3 421 aaKnown RBP12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 IL27RAQ6UWB1 636 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PDCD7Q8N8D1 485 aaKnown RBP12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 KRI1Q8N9T8 703 aaKnown RBP12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PDZD8Q8NEN9 1154 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 FBXO32Q969P5 355 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 WBP2Q969T9 261 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms