RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 CYP26A1O43174 497 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 MED7O43513 233 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 ATG13O75143 517 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 ADH1CP00326 375 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 TPM2P07951 284 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 SP9P0CG40 484 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 ARSAP15289 507 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 SOX9P48436 509 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 FZD5Q13467 585 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 CNGA2Q16280 664 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 MAN2A1Q16706 1144 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 EXOC3L4Q17RC7 722 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 TMEM196Q5HYL7 178 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 SASS6Q6UVJ0 657 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 LCLAT1Q6UWP7 414 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 PIGZQ86VD9 579 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 SPEM1Q8N4L4 309 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 UBR7Q8N806 425 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 P2RY13Q9BPV8 354 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 CCSER2Q9H7U1 834 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 LRRC4Q9HBW1 653 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 UBE2TQ9NPD8 197 aaPredicted RBP12.16□□□□□ -0.46
CCDC12-209ENST00000604164 NAGPAQ9UK23 515 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 TSPAN16Q9UKR8 245 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 COL4A2P08572 1712 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 MUC6Q6W4X9 2439 aa12.16□□□□□ -0.46
CCDC12-209ENST00000604164 ANAPC1Q9H1A4 1944 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 A0A1W2PQH9 124 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 O00370 1275 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 RARGP13631 454 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 KRT5P13647 590 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
CCDC12-209ENST00000604164 GJA4P35212 333 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 PLA2G4AP47712 749 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 CXCL12P48061 93 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 MRE11P49959 708 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 TKTL1P51854 596 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 CSTF1Q05048 431 aaKnown RBP12.15□□□□□ -0.46
CCDC12-209ENST00000604164 MTAPQ13126 283 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 RAB41Q5JT25 222 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 C10orf120Q5SQS8 335 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 TRIM65Q6PJ69 517 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 RSRC2Q7L4I2 434 aaKnown RBP12.15□□□□□ -0.46
CCDC12-209ENST00000604164 RRAGAQ7L523 313 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 GPRIN1Q7Z2K8 1008 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 SIX6OS1Q8N1H7 587 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 SCML4Q8N228 414 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 RBBP8NLQ8NC74 664 aaPredicted RBP12.15□□□□□ -0.46
CCDC12-209ENST00000604164 RIN3Q8TB24 985 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 KCTD13Q8WZ19 329 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 CD101Q93033 1021 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 NKD2Q969F2 451 aaPredicted RBP12.15□□□□□ -0.46
CCDC12-209ENST00000604164 PRMT8Q9NR22 394 aaPredicted RBP12.15□□□□□ -0.46
CCDC12-209ENST00000604164 OLA1Q9NTK5 396 aaKnown RBP12.15□□□□□ -0.46
CCDC12-209ENST00000604164 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCDC12-209ENST00000604164 STRIP2Q9ULQ0 834 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 ZNF510Q9Y2H8 683 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 PCDHGA2Q9Y5H1 932 aa12.15□□□□□ -0.46
CCDC12-209ENST00000604164 KIF26AQ9ULI4 1882 aaPredicted RBP12.14□□□□□ -0.47
CCDC12-209ENST00000604164 MYH10P35580 1976 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.14□□□□□ -0.47
CCDC12-209ENST00000604164 ZBED1O96006 694 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 EEF1GP26641 437 aaKnown RBP12.14□□□□□ -0.47
CCDC12-209ENST00000604164 EIF2DP41214 584 aaKnown RBP12.14□□□□□ -0.47
CCDC12-209ENST00000604164 COG7P83436 770 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 PDE4CQ08493 712 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 CCINQ13939 588 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 MEA1Q16626 185 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 CCDC183Q5T5S1 534 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 BTBD8Q5XKL5 378 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 PM20D1Q6GTS8 502 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 TXNDC11Q6PKC3 985 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 RBM43Q6ZSC3 357 aaKnown RBP12.14□□□□□ -0.47
CCDC12-209ENST00000604164 NUDT18Q6ZVK8 323 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 TTC30AQ86WT1 665 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 ARHGEF19Q8IW93 802 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 ADGRG2Q8IZP9 1017 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 ANKRD20A12PQ8NF67 263 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 ENOX1Q8TC92 643 aaKnown RBP12.14□□□□□ -0.47
CCDC12-209ENST00000604164 GPT2Q8TD30 523 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 ATRIPQ8WXE1 791 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 GOLGA1Q92805 767 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 TUBGCP2Q9BSJ2 902 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 DCLK3Q9C098 648 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 LINC00597Q9H2U6 94 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 CNGB3Q9NQW8 809 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 FAM86C1Q9NVL1 165 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 ANO10Q9NW15 660 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 ZSCAN32Q9NX65 697 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 APEX2Q9UBZ4 518 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCDC12-209ENST00000604164 CNTN6Q9UQ52 1028 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 PATJQ8NI35 1801 aa12.14□□□□□ -0.47
CCDC12-209ENST00000604164 HELZP42694 1942 aaKnown RBP12.13□□□□□ -0.47
CCDC12-209ENST00000604164 F5P12259 2224 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 OTOL1A6NHN0 477 aaPredicted RBP12.13□□□□□ -0.47
CCDC12-209ENST00000604164 KCNJ18B7U540 433 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 M0QYV0 167 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 PES1O00541 588 aaKnown RBP12.13□□□□□ -0.47
CCDC12-209ENST00000604164 SART1O43290 800 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms