RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 SCAMP3O14828 347 aaKnown RBP23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 PAEPP09466 180 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 ATP5C1P36542 298 aaKnown RBP23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 CCR3P51677 355 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 BCAT1P54687 386 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 GCNT1Q02742 428 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 PPP2R5DQ14738 602 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 TMEM196Q5HYL7 178 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 CCDC186Q7Z3E2 898 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 PIGZQ86VD9 579 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 TTC30AQ86WT1 665 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 ARHGEF19Q8IW93 802 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 SPEM1Q8N4L4 309 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 NKD2Q969F2 451 aaPredicted RBP23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 CHFRQ96EP1 664 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 ZFRQ96KR1 1074 aaKnown RBP23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 P2RY13Q9BPV8 354 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 NMUR1Q9HB89 426 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 CYLDQ9NQC7 956 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 PRMT8Q9NR22 394 aaPredicted RBP23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 TBC1D14Q9P2M4 693 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 NAGPAQ9UK23 515 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 USP3Q9Y6I4 520 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 GFRA3O60609 400 aa23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 TBX18O95935 607 aa23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 RARGP13631 454 aa23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 ERCC5P28715 1186 aaPredicted RBP23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 MTIF2P46199 727 aaKnown RBP23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 CXCL12P48061 93 aa23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 PSEN1P49768 467 aa23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 GALK1P51570 392 aa23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 FSTL4Q6MZW2 842 aa23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 TSSK4Q6SA08 328 aa23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 Q6ZS52 159 aa23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 IRF2BP1Q8IU81 584 aa23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 ADGRG2Q8IZP9 1017 aa23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 OSER1Q9NX31 292 aa23.04■■□□□ 1.28
PPFIA3-208ENST00000602726 RIF1Q5UIP0 2472 aaKnown RBP23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 O00370 1275 aa23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 XPO1O14980 1071 aaKnown RBP23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 IRF1P10914 325 aa23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 DRD1P21728 446 aa23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 PDE4CQ08493 712 aa23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 BST2Q10589 180 aaKnown RBP23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 GAS6Q14393 721 aa23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 TADA2BQ86TJ2 420 aa23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 FAM114A1Q8IWE2 563 aa23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 RBBP8NLQ8NC74 664 aaPredicted RBP23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 CD101Q93033 1021 aa23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 CRACR2AQ9BSW2 395 aa23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 THAP9Q9H5L6 903 aa23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 MYO15AQ9UKN7 3530 aa23.03■■□□□ 1.28
PPFIA3-208ENST00000602726 RNF225M0QZC1 329 aaPredicted RBP23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 CYP17A1P05093 508 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 RALAP11233 206 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 GOLGA8FQ08AF8 430 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 GOLGA8DPQ0D2H9 430 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 DHCR24Q15392 516 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 RAB41Q5JT25 222 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 C10orf120Q5SQS8 335 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 NAIF1Q69YI7 327 aaPredicted RBP23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 LCLAT1Q6UWP7 414 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 SCD5Q86SK9 330 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 ARHGAP18Q8N392 663 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 UBA3Q8TBC4 463 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 GPT2Q8TD30 523 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 TFAP2BQ92481 460 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 KLF16Q9BXK1 252 aaPredicted RBP23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 SEMA4AQ9H3S1 761 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 LRRC4Q9HBW1 653 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 FBRSL1Q9HCM7 1045 aaKnown RBP23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 UBE2TQ9NPD8 197 aaPredicted RBP23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 DNMT3LQ9UJW3 386 aa23.02■■□□□ 1.28
PPFIA3-208ENST00000602726 TULP2O00295 520 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 ADH1CP00326 375 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 EGFP01133 1207 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 SETSIPP0DME0 302 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 TKTL1P51854 596 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 SATB1Q01826 763 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 KLHDC10Q6PID8 442 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 GBP6Q6ZN66 633 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 ATRIPQ8WXE1 791 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 OTUB2Q96DC9 234 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 KREMEN1Q96MU8 473 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 CDK5RAP1Q96SZ6 601 aaKnown RBP23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 FAM126AQ9BYI3 521 aaPredicted RBP23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 ZSCAN32Q9NX65 697 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 CLIC5Q9NZA1 410 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 NUDT5Q9UKK9 219 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 PCDHGA2Q9Y5H1 932 aa23.01■■□□□ 1.27
PPFIA3-208ENST00000602726 PRR23AA6NEV1 266 aa23■■□□□ 1.27
PPFIA3-208ENST00000602726 ZBED1O96006 694 aa23■■□□□ 1.27
PPFIA3-208ENST00000602726 KRT5P13647 590 aa23■■□□□ 1.27
PPFIA3-208ENST00000602726 NRLP54845 237 aa23■■□□□ 1.27
PPFIA3-208ENST00000602726 STILQ15468 1287 aa23■■□□□ 1.27
PPFIA3-208ENST00000602726 CNGA2Q16280 664 aa23■■□□□ 1.27
PPFIA3-208ENST00000602726 CT47A1Q5JQC4 288 aaPredicted RBP23■■□□□ 1.27
PPFIA3-208ENST00000602726 RHBDF2Q6PJF5 856 aa23■■□□□ 1.27
PPFIA3-208ENST00000602726 ASCL5Q7RTU5 278 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms