RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 HMGXB4Q9UGU5 601 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 SH3BP1Q9Y3L3 701 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 TPRP12270 2363 aaKnown RBP13.93□□□□□ -0.18
RPS28-204ENST00000602140 A0A0A0MRY4 1105 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 A0A1B0GVL5 298 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 FAM92AA1XBS5 289 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.93□□□□□ -0.18
RPS28-204ENST00000602140 PDXKO00764 312 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 RPN1P04843 607 aaKnown RBP13.93□□□□□ -0.18
RPS28-204ENST00000602140 ZDHHC11BP0C7U3 371 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 IRF1P10914 325 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 PFKFB1P16118 471 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 TNFRSF4P43489 277 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 KIR2DL1P43626 348 aaPredicted RBP13.93□□□□□ -0.18
RPS28-204ENST00000602140 PGFP49763 221 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 MAP3K7CLP57077 242 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 GAD2Q05329 585 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 HSF5Q4G112 596 aaPredicted RBP13.93□□□□□ -0.18
RPS28-204ENST00000602140 EOGTQ5NDL2 527 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 BTBD8Q5XKL5 378 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 CEP135Q66GS9 1140 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 SPOPLQ6IQ16 392 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 SV2AQ7L0J3 742 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 BBS7Q8IWZ6 715 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 CRYBG2Q8N1P7 616 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 C12orf29Q8N999 325 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 TMC2Q8TDI7 906 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 TAF4BQ92750 862 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 WBP2Q969T9 261 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 CHAMP1Q96JM3 812 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 NACA2Q9H009 215 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 POLMQ9NP87 494 aaPredicted RBP13.93□□□□□ -0.18
RPS28-204ENST00000602140 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.93□□□□□ -0.18
RPS28-204ENST00000602140 FAM49BQ9NUQ9 324 aa13.93□□□□□ -0.18
RPS28-204ENST00000602140 CIZ1Q9ULV3 898 aaPredicted RBP13.93□□□□□ -0.18
RPS28-204ENST00000602140 LNP1A1A4G5 178 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 TBC1D3BA6NDS4 549 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 C4orf47A7E2U8 309 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 IKBKBO14920 756 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 TLR5O60602 858 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 ADAM23O75077 832 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 KRT37O76014 449 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 KCNK5O95279 499 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 ASS1P00966 412 aaKnown RBP13.92□□□□□ -0.18
RPS28-204ENST00000602140 HLA-DRAP01903 254 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 CMA1P23946 247 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 PIK3CAP42336 1068 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 DHPSP49366 369 aaPredicted RBP13.92□□□□□ -0.18
RPS28-204ENST00000602140 ANO4Q32M45 955 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 C1orf220Q5T0J3 134 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 CYP2U1Q7Z449 544 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 UNC93AQ86WB7 457 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 TMEM25Q86YD3 366 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 ETFBKMTQ8IXQ9 262 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 PHTF2Q8N3S3 785 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 OLIG1Q8TAK6 271 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 WHAMMQ8TF30 809 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 RLN3Q8WXF3 142 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 FBXO44Q9H4M3 255 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 CSNK1G1Q9HCP0 422 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 TLR8Q9NR97 1041 aaKnown RBP13.92□□□□□ -0.18
RPS28-204ENST00000602140 SPHK2Q9NRA0 654 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 BCCIPQ9P287 314 aaKnown RBP eCLIP13.92□□□□□ -0.18
RPS28-204ENST00000602140 DEC1Q9P2X7 70 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 USP25Q9UHP3 1055 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 FRMD4BQ9Y2L6 1034 aa13.92□□□□□ -0.18
RPS28-204ENST00000602140 KMT2BQ9UMN6 2715 aaPredicted RBP13.92□□□□□ -0.18
RPS28-204ENST00000602140 PATE3B3GLJ2 98 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 KHNYNO15037 678 aaKnown RBP13.91□□□□□ -0.18
RPS28-204ENST00000602140 HOXC11O43248 304 aaPredicted RBP13.91□□□□□ -0.18
RPS28-204ENST00000602140 CALUO43852 315 aaPredicted RBP13.91□□□□□ -0.18
RPS28-204ENST00000602140 TULP3O75386 442 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 TBX18O95935 607 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 FAM200BP0CF97 657 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 ADORA2BP29275 332 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 PMLP29590 882 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 P2RY2P41231 377 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 ASPAP45381 313 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 VAMP7P51809 220 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 PSAPL1Q6NUJ1 521 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 FRMD1Q8N878 549 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 HMGB4Q8WW32 186 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 PIGKQ92643 395 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 SPACA7Q96KW9 195 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 DUSP9Q99956 384 aaKnown RBP13.91□□□□□ -0.18
RPS28-204ENST00000602140 ANGPTL2Q9UKU9 493 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 HPSEQ9Y251 543 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 MYOFQ9NZM1 2061 aa13.91□□□□□ -0.18
RPS28-204ENST00000602140 CHD8Q9HCK8 2581 aa13.9□□□□□ -0.18
RPS28-204ENST00000602140 ABCA7Q8IZY2 2146 aa13.9□□□□□ -0.18
RPS28-204ENST00000602140 TCRBV21S2A2A0A5A6 115 aa13.9□□□□□ -0.18
RPS28-204ENST00000602140 TRIM24O15164 1050 aa13.9□□□□□ -0.18
RPS28-204ENST00000602140 MAP3K13O43283 966 aa13.9□□□□□ -0.18
RPS28-204ENST00000602140 MYL1P05976 194 aa13.9□□□□□ -0.18
RPS28-204ENST00000602140 IRX4P78413 519 aa13.9□□□□□ -0.18
RPS28-204ENST00000602140 ST3GAL2Q16842 350 aa13.9□□□□□ -0.18
RPS28-204ENST00000602140 PREPLQ4J6C6 727 aaPredicted RBP13.9□□□□□ -0.18
RPS28-204ENST00000602140 C10orf76Q5T2E6 689 aa13.9□□□□□ -0.18
RPS28-204ENST00000602140 DAB2IPQ5VWQ8 1189 aa13.9□□□□□ -0.18
RPS28-204ENST00000602140 LPCAT2Q7L5N7 544 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms