RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 OPRD1P41143 372 aa27.49■■□□□ 1.99
PNKP-216ENST00000601816 PGFP49763 221 aa27.49■■□□□ 1.99
PNKP-216ENST00000601816 RAD23BP54727 409 aa27.49■■□□□ 1.99
PNKP-216ENST00000601816 GAB4Q2WGN9 574 aa27.49■■□□□ 1.99
PNKP-216ENST00000601816 PRR23BQ6ZRT6 265 aa27.49■■□□□ 1.99
PNKP-216ENST00000601816 SLC4A11Q8NBS3 891 aa27.49■■□□□ 1.99
PNKP-216ENST00000601816 CYP26A1O43174 497 aa27.48■■□□□ 1.99
PNKP-216ENST00000601816 MORC3Q14149 939 aa27.48■■□□□ 1.99
PNKP-216ENST00000601816 SIM2Q14190 667 aaPredicted RBP27.48■■□□□ 1.99
PNKP-216ENST00000601816 CCDC40Q4G0X9 1142 aa27.48■■□□□ 1.99
PNKP-216ENST00000601816 WDR5BQ86VZ2 330 aa27.48■■□□□ 1.99
PNKP-216ENST00000601816 RPLP0P6Q8NHW5 317 aa27.48■■□□□ 1.99
PNKP-216ENST00000601816 CCDC26Q8TAB7 109 aa27.48■■□□□ 1.99
PNKP-216ENST00000601816 NELFBQ8WX92 580 aa27.48■■□□□ 1.99
PNKP-216ENST00000601816 OTUB2Q96DC9 234 aa27.48■■□□□ 1.99
PNKP-216ENST00000601816 CYLDQ9NQC7 956 aa27.48■■□□□ 1.99
PNKP-216ENST00000601816 GMEB2Q9UKD1 530 aa27.48■■□□□ 1.99
PNKP-216ENST00000601816 BIN1O00499 593 aa27.47■■□□□ 1.99
PNKP-216ENST00000601816 HRO43593 1189 aa27.47■■□□□ 1.99
PNKP-216ENST00000601816 IRF1P10914 325 aa27.47■■□□□ 1.99
PNKP-216ENST00000601816 BMP6P22004 513 aa27.47■■□□□ 1.99
PNKP-216ENST00000601816 HOXC13P31276 330 aa27.47■■□□□ 1.99
PNKP-216ENST00000601816 KIF11P52732 1056 aa27.47■■□□□ 1.99
PNKP-216ENST00000601816 SRSF5Q13243 272 aaKnown RBP27.47■■□□□ 1.99
PNKP-216ENST00000601816 CUL2Q13617 745 aa27.47■■□□□ 1.99
PNKP-216ENST00000601816 LPAL2Q16609 132 aa27.47■■□□□ 1.99
PNKP-216ENST00000601816 TTI2Q6NXR4 508 aa27.47■■□□□ 1.99
PNKP-216ENST00000601816 ACDQ96AP0 544 aa27.47■■□□□ 1.99
PNKP-216ENST00000601816 DUSP9Q99956 384 aaKnown RBP27.47■■□□□ 1.99
PNKP-216ENST00000601816 CTNND2Q9UQB3 1225 aa27.47■■□□□ 1.99
PNKP-216ENST00000601816 MYO16Q9Y6X6 1858 aa27.47■■□□□ 1.99
PNKP-216ENST00000601816 ZNF292O60281 2723 aa27.46■■□□□ 1.99
PNKP-216ENST00000601816 BICDL2A1A5D9 508 aa27.46■■□□□ 1.99
PNKP-216ENST00000601816 PPP1R3GB7ZBB8 358 aa27.46■■□□□ 1.99
PNKP-216ENST00000601816 ADH5P11766 374 aa27.46■■□□□ 1.99
PNKP-216ENST00000601816 YWHAEP62258 255 aaKnown RBP27.46■■□□□ 1.99
PNKP-216ENST00000601816 ARHGAP17Q68EM7 881 aa27.46■■□□□ 1.99
PNKP-216ENST00000601816 LAIR1Q6GTX8 287 aa27.46■■□□□ 1.99
PNKP-216ENST00000601816 RHBDF2Q6PJF5 856 aa27.46■■□□□ 1.99
PNKP-216ENST00000601816 FOXR2Q6PJQ5 311 aa27.46■■□□□ 1.99
PNKP-216ENST00000601816 NMUR1Q9HB89 426 aa27.46■■□□□ 1.99
PNKP-216ENST00000601816 OSER1Q9NX31 292 aa27.46■■□□□ 1.99
PNKP-216ENST00000601816 A0A1W2PQH9 124 aa27.45■■□□□ 1.98
PNKP-216ENST00000601816 TBX18O95935 607 aa27.45■■□□□ 1.98
PNKP-216ENST00000601816 ATP5C1P36542 298 aaKnown RBP27.45■■□□□ 1.98
PNKP-216ENST00000601816 EIF2DP41214 584 aaKnown RBP27.45■■□□□ 1.98
PNKP-216ENST00000601816 PXNP49023 591 aaPredicted RBP27.45■■□□□ 1.98
PNKP-216ENST00000601816 FMO5P49326 533 aa27.45■■□□□ 1.98
PNKP-216ENST00000601816 SYT13Q7L8C5 426 aa27.45■■□□□ 1.98
PNKP-216ENST00000601816 CCDC186Q7Z3E2 898 aa27.45■■□□□ 1.98
PNKP-216ENST00000601816 BBS7Q8IWZ6 715 aa27.45■■□□□ 1.98
PNKP-216ENST00000601816 CCDC163A0A0D9SF12 145 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 RARGP13631 454 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 TBXAS1P24557 533 aaPredicted RBP27.44■■□□□ 1.98
PNKP-216ENST00000601816 SLC8A3P57103 927 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 GOLGA8FQ08AF8 430 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 GOLGA8DPQ0D2H9 430 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 LRMPQ12912 555 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 LY6G5CQ5SRR4 150 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 CEP68Q76N32 757 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 CAMKK1Q8N5S9 505 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 GPR161Q8N6U8 529 aaKnown RBP27.44■■□□□ 1.98
PNKP-216ENST00000601816 HHIPQ96QV1 700 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 PNKPQ96T60 521 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 KLF16Q9BXK1 252 aaPredicted RBP27.44■■□□□ 1.98
PNKP-216ENST00000601816 POLR3BQ9NW08 1133 aaPredicted RBP27.44■■□□□ 1.98
PNKP-216ENST00000601816 NAGPAQ9UK23 515 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 WDR87Q6ZQQ6 2873 aa27.44■■□□□ 1.98
PNKP-216ENST00000601816 ID4P47928 161 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 PSEN1P49768 467 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 UBE2HP62256 183 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 GAD2Q05329 585 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 PAK1Q13153 545 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 DMC1Q14565 340 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 KLHDC10Q6PID8 442 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 ANKRD52Q8NB46 1076 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 WBP2Q969T9 261 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 UBXN6Q9BZV1 441 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.43■■□□□ 1.98
PNKP-216ENST00000601816 CHMP5Q9NZZ3 219 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 USP3Q9Y6I4 520 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 FRYLO94915 3013 aa27.43■■□□□ 1.98
PNKP-216ENST00000601816 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.42■■□□□ 1.98
PNKP-216ENST00000601816 K7EQS6 105 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 PMM2O15305 246 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 APODP05090 189 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 SLC6A11P48066 632 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 SEC13P55735 322 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 STX17P56962 302 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 GOLGA7BQ2TAP0 167 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 C10orf120Q5SQS8 335 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 BTBD8Q5XKL5 378 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.42■■□□□ 1.98
PNKP-216ENST00000601816 SCD5Q86SK9 330 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 TADA2BQ86TJ2 420 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 C12orf40Q86WS4 652 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 USP33Q8TEY7 942 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 DNMT3LQ9UJW3 386 aa27.42■■□□□ 1.98
PNKP-216ENST00000601816 LSM7Q9UK45 103 aaKnown RBP27.42■■□□□ 1.98
PNKP-216ENST00000601816 ATG2BQ96BY7 2078 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms