RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 PDE4CQ08493 712 aa18.44■□□□□ 0.54
IRF3-230ENST00000601809 GOLGA7BQ2TAP0 167 aa18.44■□□□□ 0.54
IRF3-230ENST00000601809 TMEM196Q5HYL7 178 aa18.44■□□□□ 0.54
IRF3-230ENST00000601809 NAIF1Q69YI7 327 aaPredicted RBP18.44■□□□□ 0.54
IRF3-230ENST00000601809 PM20D1Q6GTS8 502 aa18.44■□□□□ 0.54
IRF3-230ENST00000601809 LCLAT1Q6UWP7 414 aa18.44■□□□□ 0.54
IRF3-230ENST00000601809 LMAN1LQ9HAT1 526 aa18.44■□□□□ 0.54
IRF3-230ENST00000601809 FBRSL1Q9HCM7 1045 aaKnown RBP18.44■□□□□ 0.54
IRF3-230ENST00000601809 SIX2Q9NPC8 291 aa18.44■□□□□ 0.54
IRF3-230ENST00000601809 PRMT8Q9NR22 394 aaPredicted RBP18.44■□□□□ 0.54
IRF3-230ENST00000601809 TLR8Q9NR97 1041 aaKnown RBP18.44■□□□□ 0.54
IRF3-230ENST00000601809 SMPD4Q9NXE4 827 aa18.44■□□□□ 0.54
IRF3-230ENST00000601809 A0A1W2PQH9 124 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 NCAM2O15394 837 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 TBX18O95935 607 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 CALCAP01258 141 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 MBL2P11226 248 aaPredicted RBP18.43■□□□□ 0.54
IRF3-230ENST00000601809 PLA2G4AP47712 749 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 APBA1Q02410 837 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 BST2Q10589 180 aaKnown RBP18.43■□□□□ 0.54
IRF3-230ENST00000601809 MTAPQ13126 283 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 PON2Q15165 354 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 CNGA2Q16280 664 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 CC2D1AQ6P1N0 951 aaPredicted RBP18.43■□□□□ 0.54
IRF3-230ENST00000601809 GJB7Q6PEY0 223 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 KLHDC10Q6PID8 442 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 ADGRG2Q8IZP9 1017 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 RBBP8NLQ8NC74 664 aaPredicted RBP18.43■□□□□ 0.54
IRF3-230ENST00000601809 EZH1Q92800 747 aaPredicted RBP18.43■□□□□ 0.54
IRF3-230ENST00000601809 NELL1Q92832 810 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 ATP2A3Q93084 1043 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 CRACR2AQ9BSW2 395 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 IER2Q9BTL4 223 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 KLF16Q9BXK1 252 aaPredicted RBP18.43■□□□□ 0.54
IRF3-230ENST00000601809 SAMSN1Q9NSI8 373 aaKnown RBP18.43■□□□□ 0.54
IRF3-230ENST00000601809 RBM12Q9NTZ6 932 aaKnown RBP18.43■□□□□ 0.54
IRF3-230ENST00000601809 CFAP97Q9P2B7 532 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 DACH1Q9UI36 760 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.43■□□□□ 0.54
IRF3-230ENST00000601809 PCDHB4Q9Y5E5 795 aa18.43■□□□□ 0.54
IRF3-230ENST00000601809 E2F8A0AVK6 867 aa18.42■□□□□ 0.54
IRF3-230ENST00000601809 BECN2A8MW95 431 aa18.42■□□□□ 0.54
IRF3-230ENST00000601809 SP9P0CG40 484 aa18.42■□□□□ 0.54
IRF3-230ENST00000601809 PON1P27169 355 aa18.42■□□□□ 0.54
IRF3-230ENST00000601809 IFNAR2P48551 515 aa18.42■□□□□ 0.54
IRF3-230ENST00000601809 MAN2A1Q16706 1144 aa18.42■□□□□ 0.54
IRF3-230ENST00000601809 FSTL4Q6MZW2 842 aa18.42■□□□□ 0.54
IRF3-230ENST00000601809 DDX42Q86XP3 938 aaKnown RBP eCLIP18.42■□□□□ 0.54
IRF3-230ENST00000601809 ENOX1Q8TC92 643 aaKnown RBP18.42■□□□□ 0.54
IRF3-230ENST00000601809 SLC35F5Q8WV83 523 aa18.42■□□□□ 0.54
IRF3-230ENST00000601809 KCTD13Q8WZ19 329 aa18.42■□□□□ 0.54
IRF3-230ENST00000601809 CLIC5Q9NZA1 410 aa18.42■□□□□ 0.54
IRF3-230ENST00000601809 AJAP1Q9UKB5 411 aaPredicted RBP18.42■□□□□ 0.54
IRF3-230ENST00000601809 FBXO4Q9UKT5 387 aa18.42■□□□□ 0.54
IRF3-230ENST00000601809 MYOFQ9NZM1 2061 aa18.42■□□□□ 0.54
IRF3-230ENST00000601809 CYP17A1P05093 508 aa18.41■□□□□ 0.54
IRF3-230ENST00000601809 RARGP13631 454 aa18.41■□□□□ 0.54
IRF3-230ENST00000601809 CD19P15391 556 aa18.41■□□□□ 0.54
IRF3-230ENST00000601809 BRD2P25440 801 aaKnown RBP18.41■□□□□ 0.54
IRF3-230ENST00000601809 RPL34P49207 117 aaKnown RBP18.41■□□□□ 0.54
IRF3-230ENST00000601809 PSEN1P49768 467 aa18.41■□□□□ 0.54
IRF3-230ENST00000601809 CDKAL1Q5VV42 579 aa18.41■□□□□ 0.54
IRF3-230ENST00000601809 SMYD5Q6GMV2 418 aa18.41■□□□□ 0.54
IRF3-230ENST00000601809 GBP6Q6ZN66 633 aa18.41■□□□□ 0.54
IRF3-230ENST00000601809 Q6ZS52 159 aa18.41■□□□□ 0.54
IRF3-230ENST00000601809 C11orf57Q6ZUT1 292 aaPredicted RBP18.41■□□□□ 0.54
IRF3-230ENST00000601809 SCML4Q8N228 414 aa18.41■□□□□ 0.54
IRF3-230ENST00000601809 CPA6Q8N4T0 437 aa18.41■□□□□ 0.54
IRF3-230ENST00000601809 UBA3Q8TBC4 463 aa18.41■□□□□ 0.54
IRF3-230ENST00000601809 ATOH1Q92858 354 aaPredicted RBP18.41■□□□□ 0.54
IRF3-230ENST00000601809 UBE2TQ9NPD8 197 aaPredicted RBP18.41■□□□□ 0.54
IRF3-230ENST00000601809 GOLGA6L22H0YM25 854 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 SCAMP3O14828 347 aaKnown RBP18.4■□□□□ 0.54
IRF3-230ENST00000601809 MBD3O95983 291 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 SETSIPP0DME0 302 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 CHRM1P11229 460 aaPredicted RBP18.4■□□□□ 0.54
IRF3-230ENST00000601809 OPRD1P41143 372 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 MTIF2P46199 727 aaKnown RBP18.4■□□□□ 0.54
IRF3-230ENST00000601809 TKTL1P51854 596 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 KCNMA1Q12791 1236 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 EXOC3L4Q17RC7 722 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 ZNF528Q3MIS6 628 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 DGKKQ5KSL6 1271 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 RHBDF2Q6PJF5 856 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 HTR3DQ70Z44 454 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 ENOSF1Q7L5Y1 443 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 SHC3Q92529 594 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 TUBGCP2Q9BSJ2 902 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 ULBP1Q9BZM6 244 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 NDST4Q9H3R1 872 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 SPATA6Q9NWH7 488 aaPredicted RBP18.4■□□□□ 0.54
IRF3-230ENST00000601809 C2orf42Q9NWW7 574 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 TMEM63CQ9P1W3 806 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 APEX2Q9UBZ4 518 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 NFE2L3Q9Y4A8 694 aa18.4■□□□□ 0.54
IRF3-230ENST00000601809 MDM4O15151 490 aa18.39■□□□□ 0.53
IRF3-230ENST00000601809 PAPSS2O95340 614 aaPredicted RBP18.39■□□□□ 0.53
IRF3-230ENST00000601809 NFATC1O95644 943 aa18.39■□□□□ 0.53
IRF3-230ENST00000601809 ZBED1O96006 694 aa18.39■□□□□ 0.53
IRF3-230ENST00000601809 ATP5C1P36542 298 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms