RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 RARGP13631 454 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 FLT3P36888 993 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 COILP38432 576 aaPredicted RBP12.25□□□□□ -0.45
VRK3-223ENST00000601341 ATP1A2P50993 1020 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 CAV1Q03135 178 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 ADCY2Q08462 1091 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 ZNF211Q13398 564 aaPredicted RBP12.25□□□□□ -0.45
VRK3-223ENST00000601341 MAMLD1Q13495 774 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 ZNF268Q14587 947 aaPredicted RBP12.25□□□□□ -0.45
VRK3-223ENST00000601341 PTPROQ16827 1216 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 VARS2Q5ST30 1063 aaKnown RBP12.25□□□□□ -0.45
VRK3-223ENST00000601341 DENND2CQ68D51 928 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 PMF1Q6P1K2 205 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 DNAJC24Q6P3W2 148 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 ZDHHC24Q6UX98 284 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 PAQR9Q6ZVX9 377 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 PHLDB2Q86SQ0 1253 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 TMEM110Q86TL2 294 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 TMEM173Q86WV6 379 aaPredicted RBP12.25□□□□□ -0.45
VRK3-223ENST00000601341 OR10T2Q8NGX3 314 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 HERVK_113Q902F9 699 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 ART4Q93070 314 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 IGSF21Q96ID5 467 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 HSFY1Q96LI6 401 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 ZBED2Q9BTP6 218 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 TTPALQ9BTX7 342 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 SLC4A5Q9BY07 1137 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 B3GNT5Q9BYG0 378 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 PLEKHA4Q9H4M7 779 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 CYLDQ9NQC7 956 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 WHRNQ9P202 907 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 SLC4A7Q9Y6M7 1214 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 FAM169AQ9Y6X4 670 aa12.25□□□□□ -0.45
VRK3-223ENST00000601341 OR6C75A6NL08 312 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 H7C4K7 107 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 CLDN5O00501 218 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 XPO1O14980 1071 aaKnown RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 ERBB2P04626 1255 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 FAM200BP0CF97 657 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 PYGMP11217 842 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 NPR3P17342 541 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 ACADSBP45954 432 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 GSCP56915 257 aaPredicted RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 HTRA4P83105 476 aaPredicted RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 GUCY1A3Q02108 690 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 TAP1Q03518 808 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 IFFO1Q0D2I5 559 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 MRPL58Q14197 206 aaKnown RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 SIX1Q15475 284 aaPredicted RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 CCDC142Q17RM4 750 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 KRT71Q3SY84 523 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 CTXN3Q4LDR2 81 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 C6orf118Q5T5N4 469 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 CYP4A22Q5TCH4 519 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 ZNF280DQ6N043 979 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 C4orf50Q6ZRC1 276 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 ANKS3Q6ZW76 656 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 TADA2BQ86TJ2 420 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 C10orf67Q8IYJ2 551 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 DCP1BQ8IZD4 617 aaKnown RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 PHOSPHO2Q8TCD6 241 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 GRK7Q8WTQ7 553 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 BCL7CQ8WUZ0 217 aaPredicted RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 P3H4Q92791 437 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 CCT8L2Q96SF2 557 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 PKMYT1Q99640 499 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 OXCT2Q9BYC2 517 aaPredicted RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 ROPN1BQ9BZX4 212 aaPredicted RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 DPH5Q9H2P9 285 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 ROPN1Q9HAT0 212 aaPredicted RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 CXXC1Q9P0U4 656 aaPredicted RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 ATP8A1Q9Y2Q0 1164 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 INSL6Q9Y581 213 aa12.24□□□□□ -0.45
VRK3-223ENST00000601341 MRPL42Q9Y6G3 142 aaKnown RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 FNDC1Q4ZHG4 1894 aaPredicted RBP12.24□□□□□ -0.45
VRK3-223ENST00000601341 GMNCA6NCL1 334 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 C5orf60A6NFR6 353 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 CCDC85CA6NKD9 419 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 AP1G2O75843 785 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 ECEL1O95672 775 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 AGTP01019 485 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 RPL34P49207 117 aaKnown RBP12.23□□□□□ -0.45
VRK3-223ENST00000601341 RGS7P49802 495 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 NFE2Q16621 373 aaPredicted RBP12.23□□□□□ -0.45
VRK3-223ENST00000601341 USP41Q3LFD5 358 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 COL13A1Q5TAT6 717 aaPredicted RBP12.23□□□□□ -0.45
VRK3-223ENST00000601341 LLGL2Q6P1M3 1020 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 DCUN1D2Q6PH85 259 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 CEP128Q6ZU80 1094 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 TRMT10CQ7L0Y3 403 aaKnown RBP12.23□□□□□ -0.45
VRK3-223ENST00000601341 FAM35AQ86V20 835 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 LRRTM3Q86VH5 581 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 NLRP14Q86W24 1093 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 XYLT1Q86Y38 959 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 ZDHHC17Q8IUH5 632 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 FEZF2Q8TBJ5 459 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 FBXO25Q8TCJ0 367 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 MYLPFQ96A32 169 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 MCRS1Q96EZ8 462 aa12.23□□□□□ -0.45
VRK3-223ENST00000601341 SMARCD1Q96GM5 515 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms