RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ATP8B3O60423 1300 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 CACNA1BQ00975 2339 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 LNP1A1A4G5 178 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 HOXC11O43248 304 aaPredicted RBP19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 AP1G2O75843 785 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 ASS1P00966 412 aaKnown RBP19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 RPN1P04843 607 aaKnown RBP19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 APODP05090 189 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 CCDC130P13994 396 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 TIE1P35590 1138 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 ASPAP45381 313 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 ORC1Q13415 861 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 SV2AQ7L0J3 742 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 BBS7Q8IWZ6 715 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 FRMD1Q8N878 549 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 SLC2A14Q8TDB8 520 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 TMC2Q8TDI7 906 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 ZDHHC4Q9NPG8 344 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 ARHGEF4Q9NR80 690 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 KRT82Q9NSB4 513 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 CFAP45Q9UL16 551 aa19.06■□□□□ 0.64
CHMP2A-208ENST00000601220 HHLA1C9JL84 531 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 IKBKBO14920 756 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 NR3C1P04150 777 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 P2RY2P41231 377 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 NDST1P52848 882 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 SHC2P98077 582 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 GAD2Q05329 585 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 KDSRQ06136 332 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 SPOPLQ6IQ16 392 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 UNC93AQ86WB7 457 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 TMEM25Q86YD3 366 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 C12orf29Q8N999 325 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 TAF4BQ92750 862 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 EDEM2Q9BV94 578 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 EXOC1Q9NV70 894 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 MBD1Q9UIS9 605 aaPredicted RBP19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 HPSEQ9Y251 543 aa19.05■□□□□ 0.64
CHMP2A-208ENST00000601220 C4orf47A7E2U8 309 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 PATE3B3GLJ2 98 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 CDX4O14627 284 aaPredicted RBP19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 TULP3O75386 442 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 TBX18O95935 607 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 PFKFB1P16118 471 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 CMA1P23946 247 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 MAP7D1Q3KQU3 841 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 HTR3DQ70Z44 454 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 NAT16Q8N8M0 369 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 RLN3Q8WXF3 142 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 TWNKQ96RR1 684 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 KLF16Q9BXK1 252 aaPredicted RBP19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 SPHK2Q9NRA0 654 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 OSER1Q9NX31 292 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 ANGPTL2Q9UKU9 493 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 TRAF3IP3Q9Y228 551 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 SH3BP1Q9Y3L3 701 aa19.04■□□□□ 0.64
CHMP2A-208ENST00000601220 ABCA7Q8IZY2 2146 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 A0A1B0GVL5 298 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 TRIM24O15164 1050 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 TLR5O60602 858 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 ALDH1A2O94788 518 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 KCNA4P22459 653 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 MAP3K7CLP57077 242 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 MCCD1P59942 119 aaPredicted RBP19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 EOGTQ5NDL2 527 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 GPRIN1Q7Z2K8 1008 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 KCNV2Q8TDN2 545 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 CHAMP1Q96JM3 812 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 APOBEC3GQ9HC16 384 aaKnown RBP19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 CYLDQ9NQC7 956 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 STARD13Q9Y3M8 1113 aa19.03■□□□□ 0.64
CHMP2A-208ENST00000601220 LAMA1P25391 3075 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 FAM237AA0A1B0GTK4 181 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 TBC1D3BA6NDS4 549 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 KHNYNO15037 678 aaKnown RBP19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 MAPK13O15264 365 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 HLA-DRAP01903 254 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 MYL1P05976 194 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 P4HA1P13674 534 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 IRX4P78413 519 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 INCA1Q0VD86 236 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 ST3GAL2Q16842 350 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 CLEC20AQ6ZU45 233 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 CYP2U1Q7Z449 544 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 TTC30AQ86WT1 665 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 MIB1Q86YT6 1006 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 HSCBQ8IWL3 235 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 WHAMMQ8TF30 809 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 HNRNPABQ99729 332 aaKnown RBP19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 FBXO44Q9H4M3 255 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 CD248Q9HCU0 757 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 POLMQ9NP87 494 aaPredicted RBP19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 FAM49BQ9NUQ9 324 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 TMEM74BQ9NUR3 256 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 USP25Q9UHP3 1055 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 SCML2Q9UQR0 700 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 ZDHHC9Q9Y397 364 aa19.02■□□□□ 0.64
CHMP2A-208ENST00000601220 MAP1BP46821 2468 aaKnown RBP19.01■□□□□ 0.63
CHMP2A-208ENST00000601220 GIPC1O14908 333 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms