RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SAR1AQ9NR31 198 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 PDGFCQ9NRA1 345 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 BARX2Q9UMQ3 279 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 PPP2R3BQ9Y5P8 575 aa21.06■□□□□ 0.96
SHKBP1-225ENST00000600733 IRF6O14896 467 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 HBP1O60381 514 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 ENTPD5O75356 428 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 C22orf31O95567 290 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 C1QAP02745 245 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 PFKMP08237 780 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 GNAZP19086 355 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 CALB2P22676 271 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 RBL1P28749 1068 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 ATICP31939 592 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 SLC8A3P57103 927 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 PRKD1Q15139 912 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 AMHR2Q16671 573 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 CCDC62Q6P9F0 684 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 CDHR3Q6ZTQ4 885 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 ILDR2Q71H61 639 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 PPM1NQ8N819 430 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 NUDCD1Q96RS6 583 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 NGRNQ9NPE2 291 aaKnown RBP21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 ARL8BQ9NVJ2 186 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 LNPEPQ9UIQ6 1025 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 TTLL3Q9Y4R7 772 aa21.05■□□□□ 0.96
SHKBP1-225ENST00000600733 CXorf49A8MYA2 514 aaPredicted RBP21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 H0Y3Z8 333 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 TXNP10599 105 aaKnown RBP21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 SERPINB3P29508 390 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 ARFIP2P53365 341 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 CRYMQ14894 314 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 CCDC14Q49A88 953 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 WDR78Q5VTH9 848 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 POTEAQ6S8J7 498 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 BZW1Q7L1Q6 419 aaKnown RBP21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 CHSY1Q86X52 802 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 PQLC3Q8N755 202 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 STK32AQ8WU08 396 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 FAXDC2Q96IV6 333 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 TMEM120AQ9BXJ8 343 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 VRTNQ9H8Y1 702 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 LTBP3Q9NS15 1303 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 TRIM49D1C9J1S8 452 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 TPBGLP0DKB5 382 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 MCF2P10911 925 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 P4HA1P13674 534 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 PHKA2P46019 1235 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 BAG6P46379 1132 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 CCNG1P51959 295 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 TMEM132DQ14C87 1099 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 CA9Q16790 459 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 Q3C1V9 767 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 OTUD5Q96G74 571 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 PLAC1Q9HBJ0 212 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 PAK5Q9P286 719 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 TRIP11Q15643 1979 aa21.04■□□□□ 0.96
SHKBP1-225ENST00000600733 HAUS5O94927 633 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 APRTP07741 180 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 DLDP09622 509 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 ARF4P18085 180 aaPredicted RBP21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 SERPINB4P48594 390 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 INCA1Q0VD86 236 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 GJC2Q5T442 439 aaPredicted RBP21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 SMYD5Q6GMV2 418 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 RFWD3Q6PCD5 774 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 LCLAT1Q6UWP7 414 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 CAND1Q86VP6 1230 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 SLC26A11Q86WA9 606 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 SRPK1Q96SB4 655 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 TRIM56Q9BRZ2 755 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 TLE6Q9H808 572 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 CNTN3Q9P232 1028 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 CSADQ9Y600 493 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 SPAG6O75602 509 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 VTNP04004 478 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 INSRRP14616 1297 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 SLC26A2P50443 739 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 BCAR1P56945 870 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 PCDH19Q8TAB3 1148 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 CCDC110Q8TBZ0 833 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 MPHOSPH6Q99547 160 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 MECRQ9BV79 373 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 CADM1Q9BY67 442 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 ASB7Q9H672 318 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 POPDC2Q9HBU9 364 aa21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 GBA2Q9HCG7 927 aaPredicted RBP21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 ZC3H7BQ9UGR2 993 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-225ENST00000600733 APOL1O14791 398 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 UGT1A9O60656 530 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 ZBED1O96006 694 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 GOLGA7BQ2TAP0 167 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 TTC39BQ5VTQ0 682 aaPredicted RBP21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 PMF1Q6P1K2 205 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 MAP7D3Q8IWC1 876 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 FAM172AQ8WUF8 416 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 SKA1Q96BD8 255 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 PTCD3Q96EY7 689 aaKnown RBP21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 NFKBIZQ9BYH8 718 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 ELP3Q9H9T3 547 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms