RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 USP13Q92995 863 aaPredicted RBP13.67□□□□□ -0.22
SRRM1-223ENST00000600523 EXOC4Q96A65 974 aa13.67□□□□□ -0.22
SRRM1-223ENST00000600523 CYP2S1Q96SQ9 504 aa13.67□□□□□ -0.22
SRRM1-223ENST00000600523 ULBP1Q9BZM6 244 aa13.67□□□□□ -0.22
SRRM1-223ENST00000600523 EDEM3Q9BZQ6 932 aa13.67□□□□□ -0.22
SRRM1-223ENST00000600523 NUCKS1Q9H1E3 243 aaKnown RBP13.67□□□□□ -0.22
SRRM1-223ENST00000600523 OLA1Q9NTK5 396 aaKnown RBP13.67□□□□□ -0.22
SRRM1-223ENST00000600523 IFNKQ9P0W0 207 aa13.67□□□□□ -0.22
SRRM1-223ENST00000600523 DNMT3LQ9UJW3 386 aa13.67□□□□□ -0.22
SRRM1-223ENST00000600523 SH3BP1Q9Y3L3 701 aa13.67□□□□□ -0.22
SRRM1-223ENST00000600523 NOTCH4Q99466 2003 aa13.67□□□□□ -0.22
SRRM1-223ENST00000600523 DOCK6Q96HP0 2047 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 A0A1W2PQH9 124 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 PRAMEF12O95522 483 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 LSM8O95777 96 aaKnown RBP13.66□□□□□ -0.22
SRRM1-223ENST00000600523 CALCAP01258 141 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 TPM1P09493 284 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 PNMA6AP0CW24 399 aaPredicted RBP13.66□□□□□ -0.22
SRRM1-223ENST00000600523 RARGP13631 454 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 FERP16591 822 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 GPD2P43304 727 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 IFNAR2P48551 515 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 JAM2P57087 298 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 YWHAGP61981 247 aaKnown RBP eCLIP13.66□□□□□ -0.22
SRRM1-223ENST00000600523 GPC5P78333 572 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 ARID5AQ03989 594 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 FCHO2Q0JRZ9 810 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 PDGFRLQ15198 375 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 PMF1Q6P1K2 205 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 DENND1BQ6P3S1 775 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 KLHDC10Q6PID8 442 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 C1orf228Q6PIY5 440 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 TRIM72Q6ZMU5 477 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 GPIHBP1Q8IV16 184 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 PASD1Q8IV76 773 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 SCML4Q8N228 414 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 ZNF276Q8N554 614 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 KIAA1958Q8N8K9 716 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 SH3RF2Q8TEC5 729 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 NAP1L5Q96NT1 182 aaPredicted RBP13.66□□□□□ -0.22
SRRM1-223ENST00000600523 ZSWIM1Q9BR11 485 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 RPP25Q9BUL9 199 aaKnown RBP13.66□□□□□ -0.22
SRRM1-223ENST00000600523 SMG9Q9H0W8 520 aaKnown RBP13.66□□□□□ -0.22
SRRM1-223ENST00000600523 ACP6Q9NPH0 428 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 ABCC13Q9NSE7 274 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 SMPD4Q9NXE4 827 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 LSM7Q9UK45 103 aaKnown RBP13.66□□□□□ -0.22
SRRM1-223ENST00000600523 AJAP1Q9UKB5 411 aaPredicted RBP13.66□□□□□ -0.22
SRRM1-223ENST00000600523 CPQQ9Y646 472 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 DOCK8Q8NF50 2099 aa13.66□□□□□ -0.22
SRRM1-223ENST00000600523 TULP2O00295 520 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 STK25O00506 426 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 NRG2O14511 850 aaPredicted RBP13.65□□□□□ -0.22
SRRM1-223ENST00000600523 CAPN9O14815 690 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 COCHO43405 550 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 NARSO43776 548 aaKnown RBP13.65□□□□□ -0.22
SRRM1-223ENST00000600523 OLFM2O95897 454 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 COG7P83436 770 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 NR1H3Q13133 447 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 PDCLQ13371 301 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 MTF1Q14872 753 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 TMEM31Q5JXX7 168 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 TAF3Q5VWG9 929 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 PM20D1Q6GTS8 502 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 DPY19L2P1Q6NXN4 242 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 TOGARAM2Q6ZUX3 1019 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 SUGP1Q8IWZ8 645 aaKnown RBP13.65□□□□□ -0.22
SRRM1-223ENST00000600523 FAM149B1Q96BN6 582 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 MSANTD3Q96H12 275 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 PPP1R13BQ96KQ4 1090 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 SLC22A12Q96S37 553 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 PLA2G2FQ9BZM2 168 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 EPHX3Q9H6B9 360 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 CCSER2Q9H7U1 834 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 TRPV5Q9NQA5 729 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 ARHGEF3Q9NR81 526 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.65□□□□□ -0.221e-10■□□□□ 8.1
SRRM1-223ENST00000600523 TBC1D14Q9P2M4 693 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 MRPS17Q9Y2R5 130 aaKnown RBP13.65□□□□□ -0.22
SRRM1-223ENST00000600523 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.65□□□□□ -0.223e-16■□□□□ 10.7
SRRM1-223ENST00000600523 NCOR1O75376 2440 aa13.65□□□□□ -0.22
SRRM1-223ENST00000600523 TTC28Q96AY4 2481 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 TMEM221A6NGB7 291 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 M0R296 226 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 LEFTY2O00292 366 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 PIK3R2O00459 728 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 EPHB6O15197 1021 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 GLULP15104 373 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 TCF3P15923 654 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 KPNA1P52294 538 aaPredicted RBP13.64□□□□□ -0.23
SRRM1-223ENST00000600523 DAOAP59103 153 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 CDR2Q01850 454 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 PRKCQQ04759 706 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 TSR1Q2NL82 804 aaKnown RBP13.64□□□□□ -0.23
SRRM1-223ENST00000600523 FIGNQ5HY92 759 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 EFHC1Q5JVL4 640 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 SFMBT2Q5VUG0 894 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 BSPRYQ5W0U4 402 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 PPP1R2P3Q6NXS1 205 aa13.64□□□□□ -0.23
SRRM1-223ENST00000600523 ERICH1Q86X53 443 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms