RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 RAPGEF4Q8WZA2 1011 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 SDCCAG3Q96C92 435 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 FAM20AQ96MK3 541 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 FERD3LQ96RJ6 166 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 ZSWIM1Q9BR11 485 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 CCDC106Q9BWC9 280 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 CXorf21Q9HAI6 301 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 IFT122Q9HBG6 1241 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 LGR6Q9HBX8 967 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 AVENQ9NQS1 362 aaPredicted RBP10.21□□□□□ -0.78
NFKB1-212ENST00000600343 SLC17A7Q9P2U7 560 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 RNF11Q9Y3C5 154 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 C3P01024 1663 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 SPEF2Q9C093 1822 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 PCP4L1A6NKN8 68 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 PLEKHA8P1O95397 391 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 COPZ1P61923 177 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 UBAP2LQ14157 1087 aaKnown RBP10.21□□□□□ -0.78
NFKB1-212ENST00000600343 PRKD1Q15139 912 aaPredicted RBP10.21□□□□□ -0.78
NFKB1-212ENST00000600343 LLGL1Q15334 1064 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 PPP4R4Q6NUP7 873 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 DYMQ7RTS9 669 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 DGKHQ86XP1 1220 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 TANKQ92844 425 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 CDK5RAP1Q96SZ6 601 aaKnown RBP10.21□□□□□ -0.78
NFKB1-212ENST00000600343 WNT8AQ9H1J5 351 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 ABI2Q9NYB9 513 aaPredicted RBP10.21□□□□□ -0.78
NFKB1-212ENST00000600343 RWDD3Q9Y3V2 267 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 TRAF6Q9Y4K3 522 aa10.21□□□□□ -0.78
NFKB1-212ENST00000600343 MON2Q7Z3U7 1717 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 ARHGEF35A5YM69 484 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 ARHGEF15O94989 841 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 PROCP04070 461 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 KRT3P12035 628 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 SLC9A1P19634 815 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 BGNP21810 368 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 IL15P40933 162 aaPredicted RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 NEK5Q6P3R8 708 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 DSG4Q86SJ6 1040 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 CHERPQ8IWX8 916 aaKnown RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 ZNF420Q8TAQ5 688 aaPredicted RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 DCPSQ96C86 337 aaKnown RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 ARHGEF26Q96DR7 871 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 PNPLA3Q9NST1 481 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 SNTG2Q9NY99 539 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 FER1L4A9Z1Z3 1794 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 PIK3C2BO00750 1634 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 GOLGA8JA6NMD2 632 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 H3BUI4 141 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 TM9SF1O15321 606 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 DYNC1LI2O43237 492 aaPredicted RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 SORBS3O60504 671 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 SNAP91O60641 907 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 ZNF182P17025 639 aaPredicted RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 WEE1P30291 646 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 POLR2BP30876 1174 aaKnown RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 HPCAL1P37235 193 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 STAT3P40763 770 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 RCAN1P53805 252 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 DNASE1L3Q13609 305 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 ZNF746Q6NUN9 644 aaPredicted RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 OTOP3Q7RTS5 596 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 FLAD1Q8NFF5 587 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 HM13Q8TCT9 377 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 TTC17Q96AE7 1141 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 SLC29A1Q99808 456 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 INO80BQ9C086 356 aaPredicted RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 VPS37BQ9H9H4 285 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 COPS7BQ9H9Q2 264 aaPredicted RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 POLIQ9UNA4 740 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 CCDC88AQ3V6T2 1871 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 A0A087WXM4 84 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 ARPC4-TTLL3A0A0A6YYG9 625 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 PRAMEF22A3QJZ6 481 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 ASNA1O43681 348 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 NLRP6P59044 892 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 EIF3EP60228 445 aaKnown RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 CARTPTQ16568 116 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 ARHGAP44Q17R89 818 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 GLYCTKQ8IVS8 523 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 TRIM59Q8IWR1 403 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 MAP6Q96JE9 813 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 CLPBQ9H078 707 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 DNAJC18Q9H819 358 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 RMND5AQ9H871 391 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 SEPT11Q9NVA2 429 aaKnown RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 UCKL1Q9NWZ5 548 aa10.2□□□□□ -0.78
NFKB1-212ENST00000600343 PSMC3IPQ9P2W1 217 aaPredicted RBP10.2□□□□□ -0.78
NFKB1-212ENST00000600343 SGTAO43765 313 aa10.19□□□□□ -0.78
NFKB1-212ENST00000600343 PCCAP05165 728 aaPredicted RBP10.19□□□□□ -0.78
NFKB1-212ENST00000600343 TATP17735 454 aaPredicted RBP10.19□□□□□ -0.78
NFKB1-212ENST00000600343 MAP4P27816 1152 aaKnown RBP10.19□□□□□ -0.78
NFKB1-212ENST00000600343 HADHAP40939 763 aa10.19□□□□□ -0.78
NFKB1-212ENST00000600343 ECT2LQ008S8 904 aa10.19□□□□□ -0.78
NFKB1-212ENST00000600343 NME3Q13232 169 aa10.19□□□□□ -0.78
NFKB1-212ENST00000600343 PGM2L1Q6PCE3 622 aa10.19□□□□□ -0.78
NFKB1-212ENST00000600343 TMEM26Q6ZUK4 368 aa10.19□□□□□ -0.78
NFKB1-212ENST00000600343 ASCC1Q8N9N2 400 aaKnown RBP10.19□□□□□ -0.78
NFKB1-212ENST00000600343 LNX1Q8TBB1 728 aaPredicted RBP10.19□□□□□ -0.78
NFKB1-212ENST00000600343 GRK7Q8WTQ7 553 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms