RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 FYNP06241 537 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 LCP1P13796 627 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 FERP16591 822 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 PFKLP17858 780 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 HDCP19113 662 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 KRT9P35527 623 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 PRKCIP41743 596 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 SLC8A3P57103 927 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 NOMO3P69849 1222 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 TBX2Q13207 712 aaPredicted RBP14.45□□□□□ -0.1
VRK3-219ENST00000600137 PDCLQ13371 301 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 PTPN20Q4JDL3 420 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 ARHGAP15Q53QZ3 475 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 HGSNATQ68CP4 663 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 VITQ6UXI7 678 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 ZNF677Q86XU0 584 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 SCUBE3Q8IX30 993 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 C1orf131Q8NDD1 294 aaKnown RBP14.45□□□□□ -0.1
VRK3-219ENST00000600137 ELSPBP1Q96BH3 223 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 ZFRQ96KR1 1074 aaKnown RBP14.45□□□□□ -0.1
VRK3-219ENST00000600137 GCNAQ96QF7 691 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 LRRC4Q9HBW1 653 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 KIF26AQ9ULI4 1882 aaPredicted RBP14.45□□□□□ -0.1
VRK3-219ENST00000600137 HELZP42694 1942 aaKnown RBP14.45□□□□□ -0.1
VRK3-219ENST00000600137 HEPACAM2A8MVW5 462 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 E5RJQ4 531 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 UNGP13051 313 aaPredicted RBP14.44□□□□□ -0.1
VRK3-219ENST00000600137 TCF3P15923 654 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 CASP14P31944 242 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 GABRB2P47870 512 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 TUBP50607 506 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 PDE6CP51160 858 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 SLC7A9P82251 487 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 ARID5AQ03989 594 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 ZNF268Q14587 947 aaPredicted RBP14.44□□□□□ -0.1
VRK3-219ENST00000600137 ARID5BQ14865 1188 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 HECTD3Q5T447 861 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 SPECC1LQ69YQ0 1117 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 MTSS1LQ765P7 747 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 MFSD6LQ8IWD5 586 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 CPLX3Q8WVH0 158 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 WBP2Q969T9 261 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 PIWIL1Q96J94 861 aaKnown RBP14.44□□□□□ -0.1
VRK3-219ENST00000600137 PPP1R13BQ96KQ4 1090 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 AGPAT1Q99943 283 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 KXD1Q9BQD3 176 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 ANP32EQ9BTT0 268 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 SLITRK6Q9H5Y7 841 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 ZFP14Q9HCL3 533 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 TLR8Q9NR97 1041 aaKnown RBP14.44□□□□□ -0.1
VRK3-219ENST00000600137 TDP1Q9NUW8 608 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 OBP2AQ9NY56 170 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 CLIC5Q9NZA1 410 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 MUTYHQ9UIF7 546 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 NUDT5Q9UKK9 219 aa14.44□□□□□ -0.1
VRK3-219ENST00000600137 NARSO43776 548 aaKnown RBP14.43□□□□□ -0.1
VRK3-219ENST00000600137 GREM1O60565 184 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 ABL1P00519 1130 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 ERBB2P04626 1255 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 RARGP13631 454 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 HNRNPH3P31942 346 aaKnown RBP14.43□□□□□ -0.1
VRK3-219ENST00000600137 ACADSBP45954 432 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 PSEN1P49768 467 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 ZNF75DP51815 510 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 ZBED6P86452 979 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 FCHO2Q0JRZ9 810 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 PTP4A2Q12974 167 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 TDGQ13569 410 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 BSPRYQ5W0U4 402 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 ZNF571Q7Z3V5 609 aaPredicted RBP14.43□□□□□ -0.1
VRK3-219ENST00000600137 TMEM35BQ8NCS4 154 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 IRGQQ8WZA9 623 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 SYN2Q92777 582 aaPredicted RBP14.43□□□□□ -0.1
VRK3-219ENST00000600137 IQCDQ96DY2 449 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 TRPC7Q9HCX4 862 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 ARHGAP26Q9UNA1 814 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 SORCS3Q9UPU3 1222 aa14.43□□□□□ -0.1
VRK3-219ENST00000600137 TECTAO75443 2155 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 TRAV19A0A0A6YYK7 116 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 ARNTLO00327 626 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 TLR5O60602 858 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 FBXO21O94952 628 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 LSM8O95777 96 aaKnown RBP14.42□□□□□ -0.1
VRK3-219ENST00000600137 TPM3P06753 285 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 SKILP12757 684 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 AVPR1AP37288 418 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 YWHAGP61981 247 aaKnown RBP eCLIP14.42□□□□□ -0.1
VRK3-219ENST00000600137 GPC5P78333 572 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 TAF5Q15542 800 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 ZNF77Q15935 545 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 IER5LQ5T953 404 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 SFMBT2Q5VUG0 894 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 KLHDC10Q6PID8 442 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 WDR59Q6PJI9 974 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 CELF5Q8N6W0 485 aaKnown RBP14.42□□□□□ -0.1
VRK3-219ENST00000600137 SLC30A5Q8TAD4 765 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 CPA5Q8WXQ8 436 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 MRFAP1L1Q96HT8 127 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 KLF16Q9BXK1 252 aaPredicted RBP14.42□□□□□ -0.1
VRK3-219ENST00000600137 TRIM5Q9C035 493 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms