RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 COCHO43405 550 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 ADH1CP00326 375 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 CHRNB1P11230 501 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 ERCC5P28715 1186 aaPredicted RBP14.9□□□□□ -0.02
LIG1-218ENST00000599322 BCAT1P54687 386 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 MTAPQ13126 283 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 EML3Q32P44 896 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 FBXO43Q4G163 708 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 BTBD8Q5XKL5 378 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 MAMSTRQ6ZN01 415 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 ENOSF1Q7L5Y1 443 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 SPEM1Q8N4L4 309 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 ZMIZ2Q8NF64 920 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 CD101Q93033 1021 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 CNOT6LQ96LI5 555 aaKnown RBP14.9□□□□□ -0.02
LIG1-218ENST00000599322 ARID3AQ99856 593 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 STRIP2Q9ULQ0 834 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 R4GN57 208 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 TICRRQ7Z2Z1 1910 aa14.9□□□□□ -0.02
LIG1-218ENST00000599322 TRDMT1O14717 391 aaKnown RBP14.89□□□□□ -0.03
LIG1-218ENST00000599322 OLFM2O95897 454 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 TPM2P07951 284 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 ZDHHC11BP0C7U3 371 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 SETSIPP0DME0 302 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 RARGP13631 454 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 GJA4P35212 333 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 PLA2G4AP47712 749 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 KIF11P52732 1056 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 MFAP3P55082 362 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 GCNT1Q02742 428 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 BST2Q10589 180 aaKnown RBP14.89□□□□□ -0.03
LIG1-218ENST00000599322 GOLGA7BQ2TAP0 167 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 C10orf120Q5SQS8 335 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 GBP6Q6ZN66 633 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 RSRC2Q7L4I2 434 aaKnown RBP14.89□□□□□ -0.03
LIG1-218ENST00000599322 SIX6OS1Q8N1H7 587 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 GOLGA1Q92805 767 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 INTS2Q9H0H0 1204 aaKnown RBP14.89□□□□□ -0.03
LIG1-218ENST00000599322 THAP9Q9H5L6 903 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 CCSER2Q9H7U1 834 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 LMBRD1Q9NUN5 540 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 DNMT3LQ9UJW3 386 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 TSPAN16Q9UKR8 245 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 PCDHGA2Q9Y5H1 932 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 PTPRDP23468 1912 aa14.89□□□□□ -0.03
LIG1-218ENST00000599322 EP300Q09472 2414 aaPredicted RBP14.88□□□□□ -0.03
LIG1-218ENST00000599322 DENND4CQ5VZ89 1909 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.88□□□□□ -0.03
LIG1-218ENST00000599322 PES1O00541 588 aaKnown RBP14.88□□□□□ -0.03
LIG1-218ENST00000599322 XPO1O14980 1071 aaKnown RBP14.88□□□□□ -0.03
LIG1-218ENST00000599322 MED7O43513 233 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 IRF1P10914 325 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 KRT5P13647 590 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 GALK1P51570 392 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 TXNDC11Q6PKC3 985 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 SASS6Q6UVJ0 657 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 RRAGAQ7L523 313 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 CCDC186Q7Z3E2 898 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 PIGZQ86VD9 579 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 SECISBP2LQ93073 1101 aaKnown RBP14.88□□□□□ -0.03
LIG1-218ENST00000599322 LINC00597Q9H2U6 94 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 UBE2TQ9NPD8 197 aaPredicted RBP14.88□□□□□ -0.03
LIG1-218ENST00000599322 CYLDQ9NQC7 956 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 ZSCAN32Q9NX65 697 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 CLIC5Q9NZA1 410 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 RAB23Q9ULC3 237 aa14.88□□□□□ -0.03
LIG1-218ENST00000599322 MYH10P35580 1976 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 OTOGLQ3ZCN5 2332 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 F5P12259 2224 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 A0A1W2PQH9 124 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 CYP26A1O43174 497 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 MBD3O95983 291 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 ZBED1O96006 694 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 LMNAP02545 664 aaKnown RBP14.87□□□□□ -0.03
LIG1-218ENST00000599322 TKTL1P51854 596 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 COG7P83436 770 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 GAD2Q05329 585 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 FZD5Q13467 585 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 CNGA2Q16280 664 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 EXOC3L4Q17RC7 722 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 TMEM196Q5HYL7 178 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 KLHDC10Q6PID8 442 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 MAML2Q8IZL2 1156 aaPredicted RBP14.87□□□□□ -0.03
LIG1-218ENST00000599322 ADGRG2Q8IZP9 1017 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 RBBP8NLQ8NC74 664 aaPredicted RBP14.87□□□□□ -0.03
LIG1-218ENST00000599322 RNF139Q8WU17 664 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 DCLK3Q9C098 648 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 RBM12Q9NTZ6 932 aaKnown RBP14.87□□□□□ -0.03
LIG1-218ENST00000599322 SLC8A2Q9UPR5 921 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 ZNF510Q9Y2H8 683 aa14.87□□□□□ -0.03
LIG1-218ENST00000599322 GREB1Q4ZG55 1949 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 SHISA7A6NL88 538 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 HHLA1C9JL84 531 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 ADH5P11766 374 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 YWHAGP61981 247 aaKnown RBP eCLIP14.86□□□□□ -0.03
LIG1-218ENST00000599322 PDE4CQ08493 712 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 CCINQ13939 588 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 DHCR24Q15392 516 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 MAN2A1Q16706 1144 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 LCLAT1Q6UWP7 414 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms