RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 GOLGA6L10A6NI86 522 aa17.81■□□□□ 0.44
SHKBP1-216ENST00000598201 RIPK2O43353 540 aa17.81■□□□□ 0.44
SHKBP1-216ENST00000598201 CDK7P50613 346 aa17.81■□□□□ 0.44
SHKBP1-216ENST00000598201 RAB27AP51159 221 aa17.81■□□□□ 0.44
SHKBP1-216ENST00000598201 ATXN1P54253 815 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-216ENST00000598201 CA9Q16790 459 aa17.81■□□□□ 0.44
SHKBP1-216ENST00000598201 TIGD5Q53EQ6 642 aa17.81■□□□□ 0.44
SHKBP1-216ENST00000598201 SEZ6LQ9BYH1 1024 aa17.81■□□□□ 0.44
SHKBP1-216ENST00000598201 DNAI2Q9GZS0 605 aa17.81■□□□□ 0.44
SHKBP1-216ENST00000598201 HMGB1P1B2RPK0 211 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 I3L4J1 428 aa17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 ACADSBP45954 432 aa17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 RABGGTBP53611 331 aa17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 GDF10P55107 478 aa17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 IFFO1Q0D2I5 559 aa17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 KRT71Q3SY84 523 aa17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 PAN2Q504Q3 1202 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 HIBCHQ6NVY1 386 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 DSTYKQ6XUX3 929 aa17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 DDX23Q9BUQ8 820 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 SNRNP25Q9BV90 132 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 CDC42EP4Q9H3Q1 356 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-216ENST00000598201 MYBPHLA2RUH7 354 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 SGK1O00141 431 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 CKBP12277 381 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 NPR3P17342 541 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 IL4RP24394 825 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 RPL9P32969 192 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 SCNN1AP37088 669 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 PTPN9P43378 593 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 EIF3BP55884 814 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 CAV1Q03135 178 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 ADCY1Q08828 1119 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 ADIGQ0VDE8 80 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 MBTPS1Q14703 1052 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 C1orf53Q5VUE5 145 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 TRAF7Q6Q0C0 670 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 NPNTQ6UXI9 565 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 CLEC20AQ6ZU45 233 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 CALCOCO1Q9P1Z2 691 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 INPP5FQ9Y2H2 1132 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 APOC4-APOC2K7ER74 178 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 IFNB1P01574 187 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 APOC2P02655 101 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 NDUFV1P49821 464 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 ATP1A2P50993 1020 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 GPS1Q13098 491 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 BOLA3Q53S33 107 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 CD300LGQ6UXG3 332 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 TMEM86AQ8N2M4 240 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 TTC13Q8NBP0 860 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 CENPIQ92674 756 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 SYT15Q9BQS2 421 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 MED10Q9BTT4 135 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 MAGEB5Q9BZ81 275 aa17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 BCCIPQ9P287 314 aaKnown RBP eCLIP17.79■□□□□ 0.44
SHKBP1-216ENST00000598201 ERICH4A6NGS2 130 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 DCDC2CA8MYV0 355 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 LHX1P48742 406 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 MAP3K7CLP57077 242 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 KRT81Q14533 505 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 B4GALNT4Q76KP1 1039 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 ARCQ7LC44 396 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 ZNF598Q86UK7 904 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 RTN4RL1Q86UN2 441 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 ECHDC2Q86YB7 292 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 BBOF1Q8ND07 529 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 TEKT4Q8WW24 435 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 RNF157Q96PX1 679 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 RTP3Q9BQQ7 232 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 PCDH18Q9HCL0 1135 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 KRT82Q9NSB4 513 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 TMEM30AQ9NV96 361 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 DNALI1O14645 258 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 CAND2O75155 1236 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 NR1D1P20393 614 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 BRCC3P46736 316 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 CACNA2D1P54289 1103 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 SKOR1P84550 965 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 SKIDA1Q1XH10 827 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 LRRC26Q2I0M4 334 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 TTC19Q6DKK2 380 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 TRMT10CQ7L0Y3 403 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 CCHCR1Q8TD31 782 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 HASPINQ8TF76 798 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 PCED1BQ96HM7 432 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 TBCBQ99426 244 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 FRMD8P1Q9BZ68 369 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 PCDH9Q9HC56 1237 aa17.78■□□□□ 0.44
SHKBP1-216ENST00000598201 F8W810 466 aa17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 SHOX2O60902 331 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 B3GAT3O94766 335 aa17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 ACSL3O95573 720 aa17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 EIF3EP60228 445 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 PDK2Q15119 407 aa17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 TRIM60Q495X7 471 aa17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 AGBL2Q5U5Z8 902 aa17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 KDM7AQ6ZMT4 941 aa17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 UNC45BQ8IWX7 931 aa17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 PQLC3Q8N755 202 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms