RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 DDX3XO00571 662 aaKnown RBP eCLIP23.22■■□□□ 1.312e-8■■■■■ 32.9
CHMP2A-204ENST00000597848 PAPSS1O43252 624 aaPredicted RBP23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 ZDHHC11BP0C7U3 371 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 DDX6P26196 483 aaKnown RBP eCLIP23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 PGFP49763 221 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 PSEN1P49768 467 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 YWHAGP61981 247 aaKnown RBP eCLIP23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 ACAD10Q6JQN1 1059 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 MMS22LQ6ZRQ5 1243 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 SCD5Q86SK9 330 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 TDRD5Q8NAT2 981 aaKnown RBP23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 IRGQQ8WZA9 623 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 GOLGA1Q92805 767 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 ZSWIM3Q96MP5 696 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 SLC46A2Q9BY10 475 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 DEF6Q9H4E7 631 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 NMUR1Q9HB89 426 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 USTQ9Y2C2 406 aa23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 ZFP37Q9Y6Q3 630 aaPredicted RBP23.22■■□□□ 1.31
CHMP2A-204ENST00000597848 NOTCH4Q99466 2003 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 C2orf78A6NCI8 922 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 YJEFN3A6XGL0 299 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 E7ENQ6 273 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 SART1O43290 800 aaKnown RBP23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 RALAP11233 206 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 LAMP2P13473 410 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 CENPCQ03188 943 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 C2CD6Q53TS8 623 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 HECTD3Q5T447 861 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 BTBD8Q5XKL5 378 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 OLIG1Q8TAK6 271 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 FAM149B1Q96BN6 582 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 CHP1Q99653 195 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 C11orf70Q9BRQ4 267 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 NACA2Q9H009 215 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 ADAM22Q9P0K1 906 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 ZMYM5Q9UJ78 669 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 GREB1Q4ZG55 1949 aa23.21■■□□□ 1.31
CHMP2A-204ENST00000597848 PATJQ8NI35 1801 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 TRAV19A0A0A6YYK7 116 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 C2CD4DB7Z1M9 353 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 BMP1P13497 986 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 RARGP13631 454 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 HDCP19113 662 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 MMP8P22894 467 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 SNX30Q5VWJ9 437 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 BSPRYQ5W0U4 402 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 PPP1R2P3Q6NXS1 205 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 FAM183BPQ6ZVS7 135 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 PHF13Q86YI8 300 aaPredicted RBP23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 ZSCAN18Q8TBC5 510 aaPredicted RBP23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 CCDC42Q96M95 316 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 PANX2Q96RD6 677 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 CYP2S1Q96SQ9 504 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 CCSER2Q9H7U1 834 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 OSER1Q9NX31 292 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 TAS2R14Q9NYV8 317 aa23.2■■□□□ 1.3
CHMP2A-204ENST00000597848 SOBPA7XYQ1 873 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 AKR1B10O60218 316 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 LTFP02788 710 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 GZMAP12544 262 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 AVPR1AP37288 418 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 GABRB2P47870 512 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 CDK17Q00537 523 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 SLC6A3Q01959 620 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 POTEHQ6S545 545 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 TOGARAM2Q6ZUX3 1019 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 HFE2Q6ZVN8 426 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 RSRC2Q7L4I2 434 aaKnown RBP23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 BHLHA9Q7RTU4 235 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 PHLDB2Q86SQ0 1253 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 ZDHHC17Q8IUH5 632 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 CMTM8Q8IZV2 173 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 PLCD3Q8N3E9 789 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 ARL14EPQ8N8R7 260 aaPredicted RBP23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 NHEJ1Q9H9Q4 299 aaPredicted RBP23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 CLIC5Q9NZA1 410 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 PRKAG3Q9UGI9 489 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 NUDT5Q9UKK9 219 aa23.19■■□□□ 1.3
CHMP2A-204ENST00000597848 A0A087X0T9 212 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 SSU72P8A0A1W2PR75 194 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 GOLGA8SH3BPF8 625 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 TLR5O60602 858 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 FTLP02792 175 aaPredicted RBP23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 CALB1P05937 261 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 CKMP06732 381 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 FAM228BP0C875 321 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 MAPK8IP2Q13387 824 aaPredicted RBP23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 FAM78AQ5JUQ0 283 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 EFHC1Q5JVL4 640 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 C10orf120Q5SQS8 335 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 TADA2BQ86TJ2 420 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 XYLT1Q86Y38 959 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 ARID3BQ8IVW6 561 aaPredicted RBP23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 ADHFE1Q8IWW8 467 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 ST13P5Q8NFI4 369 aaPredicted RBP23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 RNF139Q8WU17 664 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 EDEM1Q92611 657 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 SLC22A12Q96S37 553 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms