RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 GAD2Q05329 585 aa11.62□□□□□ -0.55
ZNF548-207ENST00000597400 CYP4F3Q08477 520 aa11.62□□□□□ -0.55
ZNF548-207ENST00000597400 IFRD2Q12894 506 aaPredicted RBP11.62□□□□□ -0.55
ZNF548-207ENST00000597400 ZNF720Q7Z2F6 126 aa11.62□□□□□ -0.55
ZNF548-207ENST00000597400 ZCCHC9Q8N567 271 aaKnown RBP11.62□□□□□ -0.55
ZNF548-207ENST00000597400 SPRYD3Q8NCJ5 442 aa11.62□□□□□ -0.55
ZNF548-207ENST00000597400 OR5B17Q8NGF7 314 aa11.62□□□□□ -0.55
ZNF548-207ENST00000597400 MRGPRX1Q96LB2 322 aa11.62□□□□□ -0.55
ZNF548-207ENST00000597400 GABRG3Q99928 467 aa11.62□□□□□ -0.55
ZNF548-207ENST00000597400 FGFBP2Q9BYJ0 223 aa11.62□□□□□ -0.55
ZNF548-207ENST00000597400 RBAKQ9NYW8 714 aaPredicted RBP11.62□□□□□ -0.55
ZNF548-207ENST00000597400 CDH9Q9ULB4 789 aa11.62□□□□□ -0.55
ZNF548-207ENST00000597400 APOBEC2Q9Y235 224 aaKnown RBP11.62□□□□□ -0.55
ZNF548-207ENST00000597400 BTBD3Q9Y2F9 522 aa11.62□□□□□ -0.55
ZNF548-207ENST00000597400 STARD13Q9Y3M8 1113 aa11.62□□□□□ -0.55
ZNF548-207ENST00000597400 SLCO1B1Q9Y6L6 691 aa11.62□□□□□ -0.55
ZNF548-207ENST00000597400 E2F8A0AVK6 867 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 FAM149AA5PLN7 773 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 KCNJ18B7U540 433 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 WASH3PC4AMC7 463 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 ZNF217O75362 1048 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 KRT18P05783 430 aaKnown RBP11.61□□□□□ -0.55
ZNF548-207ENST00000597400 ANXA13P27216 316 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 PGFP49763 221 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 MDH1BQ5I0G3 518 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 TRMT11Q7Z4G4 463 aaKnown RBP11.61□□□□□ -0.55
ZNF548-207ENST00000597400 MYCBPAPQ8TBZ2 947 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 SETD7Q8WTS6 366 aaKnown RBP11.61□□□□□ -0.55
ZNF548-207ENST00000597400 C8orf48Q96LL4 319 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 CEP295NLQ96MC4 621 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 MRPL45Q9BRJ2 306 aaKnown RBP11.61□□□□□ -0.55
ZNF548-207ENST00000597400 CBWD1Q9BRT8 395 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 ZNF518BQ9C0D4 1074 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 DPEP3Q9H4B8 488 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 CCSER2Q9H7U1 834 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 SPHK2Q9NRA0 654 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 KIAA1522Q9P206 1035 aaPredicted RBP11.61□□□□□ -0.55
ZNF548-207ENST00000597400 DEC1Q9P2X7 70 aa11.61□□□□□ -0.55
ZNF548-207ENST00000597400 COL5A1P20908 1838 aaPredicted RBP11.6□□□□□ -0.55
ZNF548-207ENST00000597400 TRABD2BA6NFA1 517 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 EIF4E1BA6NMX2 242 aaKnown RBP11.6□□□□□ -0.55
ZNF548-207ENST00000597400 CLDN5O00501 218 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 TRIM66O15016 1216 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 GREM1O60565 184 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 CILPO75339 1184 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 WARSP23381 471 aaKnown RBP11.6□□□□□ -0.55
ZNF548-207ENST00000597400 ANO4Q32M45 955 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 RILPL1Q5EBL4 403 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 ARL6IP4Q66PJ3 421 aaKnown RBP11.6□□□□□ -0.55
ZNF548-207ENST00000597400 DYMQ7RTS9 669 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 CHPFQ8IZ52 775 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 KCNV2Q8TDN2 545 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 DNASE2BQ8WZ79 361 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 LARP4BQ92615 738 aaKnown RBP11.6□□□□□ -0.55
ZNF548-207ENST00000597400 HVCN1Q96D96 273 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 HPDLQ96IR7 371 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 FAM124BQ9H5Z6 455 aaPredicted RBP11.6□□□□□ -0.55
ZNF548-207ENST00000597400 GAREM1Q9H706 876 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 TM7SF3Q9NS93 570 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 DNAJC17Q9NVM6 304 aaKnown RBP11.6□□□□□ -0.55
ZNF548-207ENST00000597400 TBC1D7Q9P0N9 293 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 TBC1D14Q9P2M4 693 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 SUSD2Q9UGT4 822 aa11.6□□□□□ -0.55
ZNF548-207ENST00000597400 NYNRINQ9P2P1 1898 aaKnown RBP11.59□□□□□ -0.55
ZNF548-207ENST00000597400 GOLGA8CPA6NN73 597 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 NDUFS2O75306 463 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 TMEM191BP0C7N4 346 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 IRF1P10914 325 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 ITPKBP27987 946 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 ABCD1P33897 745 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 PPP3CCP48454 512 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 RBP5P82980 135 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 L1TD1Q5T7N2 865 aaKnown RBP11.59□□□□□ -0.55
ZNF548-207ENST00000597400 MCTP1Q6DN14 999 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 GRAMD4Q6IC98 578 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 KIAA1324Q6UXG2 1013 aaKnown RBP11.59□□□□□ -0.55
ZNF548-207ENST00000597400 DBX2Q6ZNG2 339 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 USP49Q70CQ1 688 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 DPH6Q7L8W6 267 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 HS2ST1Q7LGA3 356 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 DDX42Q86XP3 938 aaKnown RBP eCLIP11.59□□□□□ -0.55
ZNF548-207ENST00000597400 SCUBE3Q8IX30 993 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 C1orf216Q8TAB5 229 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 SCAMP5Q8TAC9 235 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 PIP4K2CQ8TBX8 421 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 CACTINQ8WUQ7 758 aaKnown RBP11.59□□□□□ -0.55
ZNF548-207ENST00000597400 OTUB2Q96DC9 234 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 CALML4Q96GE6 196 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 TOE1Q96GM8 510 aaKnown RBP11.59□□□□□ -0.55
ZNF548-207ENST00000597400 AK8Q96MA6 479 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 SLITRK1Q96PX8 696 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 MKRN2Q9H000 416 aaKnown RBP11.59□□□□□ -0.55
ZNF548-207ENST00000597400 PCIF1Q9H4Z3 704 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 PRDM16Q9HAZ2 1276 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 INTS13Q9NVM9 706 aa11.59□□□□□ -0.55
ZNF548-207ENST00000597400 WSB2Q9NYS7 404 aaPredicted RBP11.59□□□□□ -0.55
ZNF548-207ENST00000597400 HECTD1Q9ULT8 2610 aa11.58□□□□□ -0.55
ZNF548-207ENST00000597400 A0A1B0GTW7 788 aa11.58□□□□□ -0.56
ZNF548-207ENST00000597400 NEDD8-MDP1E9PL57 170 aa11.58□□□□□ -0.56
ZNF548-207ENST00000597400 SLC26A4O43511 780 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms