RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 THADAQ6YHU6 1953 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 A0A0A0MRY4 1105 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 E2F8A0AVK6 867 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 TBX18O95935 607 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 ADH1CP00326 375 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 SLFN14P0C7P3 912 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 ZDHHC11BP0C7U3 371 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 GRIA2P42262 883 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 NDST1P52848 882 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 C1orf220Q5T0J3 134 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 GPRIN1Q7Z2K8 1008 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 TMEM25Q86YD3 366 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 CEP57L1Q8IYX8 460 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 PDZD8Q8NEN9 1154 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 CCDC26Q8TAB7 109 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 OLIG1Q8TAK6 271 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 HMGB4Q8WW32 186 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 SNX21Q969T3 373 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 SMARCD1Q96GM5 515 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 MBD1Q9UIS9 605 aaPredicted RBP17.04■□□□□ 0.32
LIM2-202ENST00000596399 ANGPTL2Q9UKU9 493 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 HCN2Q9UL51 889 aa17.04■□□□□ 0.32
LIM2-202ENST00000596399 ATP8B3O60423 1300 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 NUP205Q92621 2012 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 A0A1B0GVL5 298 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 PTGER3P43115 390 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 MAP3K7CLP57077 242 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 IRX4P78413 519 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 SNX30Q5VWJ9 437 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 CYP2U1Q7Z449 544 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 DDX42Q86XP3 938 aaKnown RBP eCLIP17.03■□□□□ 0.32
LIM2-202ENST00000596399 ETFBKMTQ8IXQ9 262 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 TMEFF1Q8IYR6 380 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 KIAA1958Q8N8K9 716 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 OVCA2Q8WZ82 227 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 PIGKQ92643 395 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 JAKMIP2Q96AA8 810 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 TNIP3Q96KP6 325 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 TWNKQ96RR1 684 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 TMEM74BQ9NUR3 256 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 EXOC1Q9NV70 894 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 OSER1Q9NX31 292 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 TBC1D14Q9P2M4 693 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 RCOR1Q9UKL0 485 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 SH3BP1Q9Y3L3 701 aa17.03■□□□□ 0.32
LIM2-202ENST00000596399 CFAP47Q6ZTR5 3102 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 TCRBV21S2A2A0A5A6 115 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 FAM92AA1XBS5 289 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 TBC1D3BA6NDS4 549 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 CDX4O14627 284 aaPredicted RBP17.02■□□□□ 0.32
LIM2-202ENST00000596399 GREM1O60565 184 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 TULP3O75386 442 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 NR3C1P04150 777 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 ADORA2BP29275 332 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 EIF2DP41214 584 aaKnown RBP17.02■□□□□ 0.32
LIM2-202ENST00000596399 P2RY2P41231 377 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 WASP42768 502 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 ASPAP45381 313 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 GAD2Q05329 585 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 ANO4Q32M45 955 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 ZACNQ401N2 412 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 SV2AQ7L0J3 742 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 MIB1Q86YT6 1006 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 DEFB119Q8N690 84 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 GOLGA5Q8TBA6 731 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 SPHK2Q9NRA0 654 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 BCCIPQ9P287 314 aaKnown RBP eCLIP17.02■□□□□ 0.32
LIM2-202ENST00000596399 NUDT5Q9UKK9 219 aa17.02■□□□□ 0.32
LIM2-202ENST00000596399 CEP295Q9C0D2 2601 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 ASPMQ8IZT6 3477 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 ATXN2Q99700 1313 aaKnown RBP17.01■□□□□ 0.31
LIM2-202ENST00000596399 KHNYNO15037 678 aaKnown RBP17.01■□□□□ 0.31
LIM2-202ENST00000596399 MDM4O15151 490 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 CYP26A1O43174 497 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 ALDH1A2O94788 518 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 PRR29P0C7W0 189 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 PFKFB1P16118 471 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 TNFRSF4P43489 277 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 NOVA1P51513 510 aaKnown RBP17.01■□□□□ 0.31
LIM2-202ENST00000596399 AP3M2P53677 418 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 SGSM1Q2NKQ1 1148 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 MAP7D1Q3KQU3 841 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 C10orf76Q5T2E6 689 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 CEP135Q66GS9 1140 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 SLC9A9Q8IVB4 645 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 CRYBG2Q8N1P7 616 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 PGBD3Q8N328 593 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 NACA2Q9H009 215 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 APOBEC3GQ9HC16 384 aaKnown RBP17.01■□□□□ 0.31
LIM2-202ENST00000596399 CSNK1G1Q9HCP0 422 aa17.01■□□□□ 0.31
LIM2-202ENST00000596399 PDXKO00764 312 aa17■□□□□ 0.31
LIM2-202ENST00000596399 MAP3K13O43283 966 aa17■□□□□ 0.31
LIM2-202ENST00000596399 TLR5O60602 858 aa17■□□□□ 0.31
LIM2-202ENST00000596399 TOP3BO95985 862 aaKnown RBP17■□□□□ 0.31
LIM2-202ENST00000596399 ASS1P00966 412 aaKnown RBP17■□□□□ 0.31
LIM2-202ENST00000596399 HLA-DRAP01903 254 aa17■□□□□ 0.31
LIM2-202ENST00000596399 HSP90AA1P07900 732 aaKnown RBP17■□□□□ 0.31
LIM2-202ENST00000596399 TRIM49P0CI25 452 aa17■□□□□ 0.31
LIM2-202ENST00000596399 TRIM49CP0CI26 452 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms