RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 DMAP1Q9NPF5 467 aaPredicted RBP16.88■□□□□ 0.29
LINC02560-201ENST00000596379 TMEM9BQ9NQ34 198 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 COMMD8Q9NX08 183 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 GMIPQ9P107 970 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 BCCIPQ9P287 314 aaKnown RBP eCLIP16.88■□□□□ 0.29
LINC02560-201ENST00000596379 PI4KAP42356 2102 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 TBC1D3BA6NDS4 549 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 CDX4O14627 284 aaPredicted RBP16.87■□□□□ 0.29
LINC02560-201ENST00000596379 AP1G2O75843 785 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 BEST1O76090 585 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 VNN1O95497 513 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 ZDHHC11BP0C7U3 371 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 P2RY2P41231 377 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 ME1P48163 572 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 TUBP50607 506 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 STK4Q13043 487 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 RESP18Q5W5W9 173 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 BTBD8Q5XKL5 378 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 LPCAT2Q7L5N7 544 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 BBS7Q8IWZ6 715 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 TMEFF1Q8IYR6 380 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 PGBD3Q8N328 593 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 HMGB4Q8WW32 186 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 SMOQ99835 787 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 KRT82Q9NSB4 513 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 DMAC2Q9NW81 257 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 SERTAD1Q9UHV2 236 aa16.87■□□□□ 0.29
LINC02560-201ENST00000596379 MBD1Q9UIS9 605 aaPredicted RBP16.87■□□□□ 0.29
LINC02560-201ENST00000596379 USP24Q9UPU5 2620 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 TCRBV21S2A2A0A5A6 115 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 FAM92AA1XBS5 289 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 KLRC4O43908 158 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 TULP3O75386 442 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 ZSCAN22P10073 491 aaPredicted RBP16.86■□□□□ 0.29
LINC02560-201ENST00000596379 IRF1P10914 325 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 CCDC130P13994 396 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 PGFP49763 221 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 DLG4P78352 724 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 ORC1Q13415 861 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 SGSM1Q2NKQ1 1148 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 ANO4Q32M45 955 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 MAP7D1Q3KQU3 841 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 SH3PXD2AQ5TCZ1 1133 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 ARMCX6Q7L4S7 300 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 TMEM25Q86YD3 366 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 ETFBKMTQ8IXQ9 262 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 ZMIZ2Q8NF64 920 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 SPACA7Q96KW9 195 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 NACA2Q9H009 215 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 SPHK2Q9NRA0 654 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 DEC1Q9P2X7 70 aa16.86■□□□□ 0.29
LINC02560-201ENST00000596379 ASCC3Q8N3C0 2202 aaKnown RBP16.85■□□□□ 0.29
LINC02560-201ENST00000596379 TNRC6BQ9UPQ9 1833 aaKnown RBP16.85■□□□□ 0.29
LINC02560-201ENST00000596379 LAMA1P25391 3075 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 HOXC11O43248 304 aaPredicted RBP16.85■□□□□ 0.29
LINC02560-201ENST00000596379 F13A1P00488 732 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 PTGER3P43115 390 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 MAP3K7CLP57077 242 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 UAP1L1Q3KQV9 507 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 TRIM61Q5EBN2 209 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 CEP57L1Q8IYX8 460 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 CRYBG2Q8N1P7 616 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 ZNF513Q8N8E2 541 aaPredicted RBP16.85■□□□□ 0.29
LINC02560-201ENST00000596379 KIAA0895Q8NCT3 520 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 SLC2A14Q8TDB8 520 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 PAGE5Q96GU1 130 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 TMEM74BQ9NUR3 256 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 HMGXB4Q9UGU5 601 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 CEP192Q8TEP8 1941 aa16.85■□□□□ 0.29
LINC02560-201ENST00000596379 PLXND1Q9Y4D7 1925 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 TRIM24O15164 1050 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 TLR5O60602 858 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 TBX18O95935 607 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 RPN1P04843 607 aaKnown RBP16.84■□□□□ 0.29
LINC02560-201ENST00000596379 SLFN14P0C7P3 912 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 P4HA1P13674 534 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 NDST1P52848 882 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 ZNF252P-AS1Q0IIN9 211 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 BYSLQ13895 437 aaKnown RBP16.84■□□□□ 0.29
LINC02560-201ENST00000596379 ZACNQ401N2 412 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 KMT5BQ4FZB7 885 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 PREPLQ4J6C6 727 aaPredicted RBP16.84■□□□□ 0.29
LINC02560-201ENST00000596379 C10orf76Q5T2E6 689 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 SYT12Q8IV01 421 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 SLC9A9Q8IVB4 645 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 C12orf29Q8N999 325 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 KCNV2Q8TDN2 545 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 TMEM174Q8WUU8 243 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 SNX21Q969T3 373 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 DUSP9Q99956 384 aaKnown RBP16.84■□□□□ 0.29
LINC02560-201ENST00000596379 KCTD10Q9H3F6 313 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 FBXO44Q9H4M3 255 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 CSNK1G1Q9HCP0 422 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 TLR8Q9NR97 1041 aaKnown RBP16.84■□□□□ 0.29
LINC02560-201ENST00000596379 FAM49BQ9NUQ9 324 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 EXOC1Q9NV70 894 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 EVLQ9UI08 416 aaPredicted RBP16.84■□□□□ 0.29
LINC02560-201ENST00000596379 HCN2Q9UL51 889 aa16.84■□□□□ 0.29
LINC02560-201ENST00000596379 ACTN4O43707 911 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms