RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ABCB6Q9NP58 842 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 METTL5Q9NRN9 209 aaKnown RBP13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 ZFHX4Q86UP3 3567 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 TSC2P49815 1807 aa13.71□□□□□ -0.22
SHKBP1-209ENST00000595803 MTMR11A4FU01 709 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 F8VP50 259 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 PROSCO94903 275 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 ATP1A1P05023 1023 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 RB1P06400 928 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 LINC00271P0C7V0 271 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 CTSAP10619 480 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 HAPLN1P10915 354 aaPredicted RBP13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 DESP17661 470 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 COMTP21964 271 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 RFC1P35251 1148 aaPredicted RBP13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 SCNN1AP37088 669 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 RPL7AP62424 266 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 RPL10AP62906 217 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 ADIGQ0VDE8 80 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 TUBB2AQ13885 445 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 PIGHQ14442 188 aaPredicted RBP13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 MGAT5BQ3V5L5 792 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 ASCL5Q7RTU5 278 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 TMC7Q7Z402 723 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 NT5DC3Q86UY8 548 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 RNF135Q8IUD6 432 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 JOSD2Q8TAC2 188 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 PABPC5Q96DU9 382 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 MRPL38Q96DV4 380 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 C8orf48Q96LL4 319 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 SAMD11Q96NU1 681 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 CLSTN3Q9BQT9 956 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 TUBB2BQ9BVA1 445 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 PNPLA8Q9NP80 782 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 CNGB3Q9NQW8 809 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 USTQ9Y2C2 406 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 SLC27A5Q9Y2P5 690 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 MYH10P35580 1976 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 VWA8A3KMH1 1905 aa13.7□□□□□ -0.22
SHKBP1-209ENST00000595803 RIF1Q5UIP0 2472 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 KMT2BQ9UMN6 2715 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 HHLA1C9JL84 531 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 ADAM12O43184 909 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 SART1O43290 800 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 NCK2O43639 380 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 SPOPO43791 374 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 GPD1P21695 349 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 PSMA2P25787 234 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 ELF1P32519 619 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 SSR1P43307 286 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 ID4P47928 161 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 TUFMP49411 452 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 NDUFV1P49821 464 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 ROR1Q01973 937 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 ADCY1Q08828 1119 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 DUSP4Q13115 394 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 RAB33AQ14088 237 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 COL19A1Q14993 1142 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 PTPROQ16827 1216 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 DDR2Q16832 855 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 RAB41Q5JT25 222 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 PAPD7Q5XG87 772 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 TPGS2Q68CL5 300 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 OLFML1Q6UWY5 402 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 TRIM67Q6ZTA4 783 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 NUP93Q8N1F7 819 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 FBXL6Q8N531 539 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 ZNF461Q8TAF7 563 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 RXFP2Q8WXD0 754 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 SEPT5Q99719 369 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 ULBP1Q9BZM6 244 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 TRIM7Q9C029 511 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 ZBP1Q9H171 429 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 GOLPH3Q9H4A6 298 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 RXFP1Q9HBX9 757 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 FNIP2Q9P278 1114 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 AFF4Q9UHB7 1163 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 TMEM59LQ9UK28 342 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 LZTS1Q9Y250 596 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 HYOU1Q9Y4L1 999 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 SAR1BQ9Y6B6 198 aa13.69□□□□□ -0.22
SHKBP1-209ENST00000595803 WDR27A2RRH5 827 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 LILRB3O75022 631 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 GRAP2O75791 330 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 ZBED1O96006 694 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 GLI1P08151 1106 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 USP17L7P0C7H9 530 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 PDGFRAP16234 1089 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 PRLRP16471 622 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 TCP1P17987 556 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 DNA2P51530 1060 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 UBE3AQ05086 875 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 ACAP1Q15027 740 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 TAF5Q15542 800 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 SMAD2Q15796 467 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 TCEAL5Q5H9L2 206 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 CC2D1AQ6P1N0 951 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 SLC26A9Q7LBE3 791 aa13.68□□□□□ -0.22
SHKBP1-209ENST00000595803 EMC1Q8N766 993 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms