RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 LYSMD4Q5XG99 296 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 OVOS1Q6IE37 1185 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 TRIM59Q8IWR1 403 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 TMEM130Q8N3G9 435 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 MINDY1Q8N5J2 469 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 OR2I1PQ8NGU4 316 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 SPACA7Q96KW9 195 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 CAMK1GQ96NX5 476 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 FIZ1Q96SL8 496 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 TIPINQ9BVW5 301 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 NDST4Q9H3R1 872 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 KIF9Q9HAQ2 790 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 SIK3Q9Y2K2 1263 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 PCDHB9Q9Y5E1 797 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 CFAP46Q8IYW2 2715 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 TTC26A0AVF1 554 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 ANTXRLA6NF34 631 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 RNF225M0QZC1 329 aaPredicted RBP13.66□□□□□ -0.22
SCAF1-202ENST00000595242 C1QL1O75973 258 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 FTH1P19P0C7X4 201 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 MAPTP10636 758 aaKnown RBP13.66□□□□□ -0.22
SCAF1-202ENST00000595242 MCF2P10911 925 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 HOXD12P35452 270 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 HOXD13P35453 343 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 KRT9P35527 623 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 TUFMP49411 452 aaKnown RBP13.66□□□□□ -0.22
SCAF1-202ENST00000595242 CDR1P51861 262 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 CASP5P51878 434 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 PPP2R3AQ06190 1150 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 MAPK7Q13164 816 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 SYCP1Q15431 976 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 DUOXA1Q1HG43 343 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 MGAT5BQ3V5L5 792 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 SPDYCQ5MJ68 293 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 LMBRD2Q68DH5 695 aaPredicted RBP13.66□□□□□ -0.22
SCAF1-202ENST00000595242 RAD9BQ6WBX8 426 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 DSTYKQ6XUX3 929 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 TMEM150AQ86TG1 271 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 CCDC33Q8N5R6 958 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 CEP76Q8TAP6 659 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 CRELD1Q96HD1 420 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 UBL7Q96S82 380 aaPredicted RBP13.66□□□□□ -0.22
SCAF1-202ENST00000595242 TCHPQ9BT92 498 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 STRA6Q9BX79 667 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 EDEM3Q9BZQ6 932 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 DUS2Q9NX74 493 aaKnown RBP13.66□□□□□ -0.22
SCAF1-202ENST00000595242 TRMT1Q9NXH9 659 aaKnown RBP13.66□□□□□ -0.22
SCAF1-202ENST00000595242 MMP17Q9ULZ9 603 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 KNTC1P50748 2209 aa13.66□□□□□ -0.22
SCAF1-202ENST00000595242 PHLPP2Q6ZVD8 1323 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 MYO18BQ8IUG5 2567 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 ARHGEF35A5YM69 484 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 K7EQS6 105 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 SLC16A3O15427 465 aaKnown RBP13.65□□□□□ -0.22
SCAF1-202ENST00000595242 CALUO43852 315 aaPredicted RBP13.65□□□□□ -0.22
SCAF1-202ENST00000595242 SH3BP5O60239 455 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 ALDH1A2O94788 518 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 FAM13AO94988 1023 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 SERPINF2P08697 491 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 CCDC175P0C221 793 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 PLA2G2AP14555 144 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 DDX6P26196 483 aaKnown RBP eCLIP13.65□□□□□ -0.22
SCAF1-202ENST00000595242 HNRNPH3P31942 346 aaKnown RBP13.65□□□□□ -0.22
SCAF1-202ENST00000595242 ZBED6P86452 979 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 CDK17Q00537 523 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 RAD51AP2Q09MP3 1159 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 ALCAMQ13740 583 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 SLC10A6Q3KNW5 377 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 TXNDC8Q6A555 127 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 TMEM92Q6UXU6 159 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 TTC16Q8NEE8 873 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 OR8K1Q8NGG5 319 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 WHAMMQ8TF30 809 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 GIPC2Q8TF65 315 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 TMEM174Q8WUU8 243 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 OSCP1Q8WVF1 389 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 SLC39A7Q92504 469 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 ATP2A3Q93084 1043 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 TARS2Q9BW92 718 aaKnown RBP13.65□□□□□ -0.22
SCAF1-202ENST00000595242 MRPL4Q9BYD3 311 aaKnown RBP13.65□□□□□ -0.22
SCAF1-202ENST00000595242 PARVGQ9HBI0 331 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 CAPN10Q9HC96 672 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 TBC1D7Q9P0N9 293 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 LUC7L2Q9Y383 392 aaKnown RBP13.65□□□□□ -0.22
SCAF1-202ENST00000595242 ADGRG1Q9Y653 693 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 ZNF462Q96JM2 2506 aa13.65□□□□□ -0.22
SCAF1-202ENST00000595242 UQCRHLA0A096LP55 91 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 SOWAHDA6NJG2 315 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 TK2O00142 265 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 ARHGAP33O14559 1287 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 ABLIM1O14639 778 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 CETN3O15182 167 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 PPP1R37O75864 691 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 F11P03951 625 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 UQCRHP07919 91 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 HARSP12081 509 aaKnown RBP13.64□□□□□ -0.23
SCAF1-202ENST00000595242 HNRNPLP14866 589 aaKnown RBP eCLIP13.64□□□□□ -0.23
SCAF1-202ENST00000595242 TYMPP19971 482 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 PROZP22891 400 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 AARSP49588 968 aaKnown RBP eCLIP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms