RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 TDP1Q9NUW8 608 aa24.06■■□□□ 1.44
PNKP-205ENST00000595081 CUL9Q8IWT3 2517 aa24.06■■□□□ 1.44
PNKP-205ENST00000595081 NUP210Q8TEM1 1887 aaPredicted RBP24.05■■□□□ 1.44
PNKP-205ENST00000595081 DPYSL4O14531 572 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 DCXO43602 365 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 TLR5O60602 858 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 OLFM2O95897 454 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 RARGP13631 454 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 CHRNB2P17787 502 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 CDR2Q01850 454 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 FIGNQ5HY92 759 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 CELF5Q8N6W0 485 aaKnown RBP24.05■■□□□ 1.44
PNKP-205ENST00000595081 TTC16Q8NEE8 873 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 RIN3Q8TB24 985 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 NUP58Q9BVL2 599 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 SMPD4Q9NXE4 827 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 TJP2Q9UDY2 1190 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 NUDT5Q9UKK9 219 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 MYO6Q9UM54 1294 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 CEP83Q9Y592 693 aa24.05■■□□□ 1.44
PNKP-205ENST00000595081 YJEFN3A6XGL0 299 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 E5RJQ4 531 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 E7ENQ6 273 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 TBX18O95935 607 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 FERP16591 822 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 PFKLP17858 780 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 TUBP50607 506 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 DAOAP59103 153 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 YWHAGP61981 247 aaKnown RBP eCLIP24.04■■□□□ 1.44
PNKP-205ENST00000595081 E4F1Q66K89 784 aaPredicted RBP24.04■■□□□ 1.44
PNKP-205ENST00000595081 ZNF677Q86XU0 584 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 SCUBE3Q8IX30 993 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 CPLX3Q8WVH0 158 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 E2F7Q96AV8 911 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 CPXM1Q96SM3 734 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 EDEM3Q9BZQ6 932 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 CYLDQ9NQC7 956 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.04■■□□□ 1.44
PNKP-205ENST00000595081 ARHGAP26Q9UNA1 814 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 DUSP12Q9UNI6 340 aa24.04■■□□□ 1.44
PNKP-205ENST00000595081 MBL2P11226 248 aaPredicted RBP24.03■■□□□ 1.44
PNKP-205ENST00000595081 PSMC3P17980 439 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 ACADSBP45954 432 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 PSEN1P49768 467 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 SLC7A9P82251 487 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 ZXDBP98169 803 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 FMO1Q01740 532 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 ZNF268Q14587 947 aaPredicted RBP24.03■■□□□ 1.44
PNKP-205ENST00000595081 SARM1Q6SZW1 724 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 HFE2Q6ZVN8 426 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 IRF2BP2Q7Z5L9 587 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 TMEM110Q86TL2 294 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 MFSD6LQ8IWD5 586 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 ARHGAP18Q8N392 663 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 TMEM35BQ8NCS4 154 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 PPP1R13BQ96KQ4 1090 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 ANP32EQ9BTT0 268 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 NACA2Q9H009 215 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 OBP2AQ9NY56 170 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 CLIC5Q9NZA1 410 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 CPQQ9Y646 472 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 ITIH6Q6UXX5 1313 aa24.03■■□□□ 1.44
PNKP-205ENST00000595081 A0A1W2PQJ5 194 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 MDM4O15151 490 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 PAPSS1O43252 624 aaPredicted RBP24.02■■□□□ 1.44
PNKP-205ENST00000595081 FBXO21O94952 628 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 GYPCP04921 128 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 SRFP11831 508 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 CDH5P33151 784 aaPredicted RBP24.02■■□□□ 1.44
PNKP-205ENST00000595081 GPC5P78333 572 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 ZXDAP98168 799 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 ASIC2Q16515 512 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 PTPN20Q4JDL3 420 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 C10orf120Q5SQS8 335 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 SFMBT2Q5VUG0 894 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 SCML4Q8N228 414 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 BPIFB1Q8TDL5 484 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 SH3RF2Q8TEC5 729 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 DEPDC1BQ8WUY9 529 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 NOX5Q96PH1 765 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 TRMT61BQ9BVS5 477 aaKnown RBP24.02■■□□□ 1.44
PNKP-205ENST00000595081 KIF9Q9HAQ2 790 aa24.02■■□□□ 1.44
PNKP-205ENST00000595081 LSM8O95777 96 aaKnown RBP24.01■■□□□ 1.43
PNKP-205ENST00000595081 ERBB2P04626 1255 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 RALAP11233 206 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 GDI1P31150 447 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 NAA35Q5VZE5 725 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 BSPRYQ5W0U4 402 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 VSTM4Q8IW00 320 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 YAF2Q8IY57 180 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 UBALD2Q8IYN6 164 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 CPA5Q8WXQ8 436 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 IRGQQ8WZA9 623 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 EDEM1Q92611 657 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 ZFRQ96KR1 1074 aaKnown RBP24.01■■□□□ 1.43
PNKP-205ENST00000595081 PCDHB18PQ96TA0 734 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 TRIM5Q9C035 493 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 CAPN11Q9UMQ6 739 aa24.01■■□□□ 1.43
PNKP-205ENST00000595081 PI4K2BG5E9Z4 385 aa24■■□□□ 1.43
PNKP-205ENST00000595081 LEFTY2O00292 366 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms