RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ATP13A4Q4VNC1 1196 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 POLNQ7Z5Q5 900 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 DEFB106AQ8N104 65 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 SCML4Q8N228 414 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 SCAMP5Q8TAC9 235 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 SP7Q8TDD2 431 aaPredicted RBP15.89■□□□□ 0.13
VRK3-207ENST00000594092 FAM172AQ8WUF8 416 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 SLC2A13Q96QE2 648 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 C11orf84Q9BUA3 381 aaPredicted RBP15.89■□□□□ 0.13
VRK3-207ENST00000594092 WDR27A2RRH5 827 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 CCDC188H7C350 402 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 KRIT1O00522 736 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 TRIM66O15016 1216 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 TFE3P19532 575 aaPredicted RBP15.88■□□□□ 0.13
VRK3-207ENST00000594092 MCM3P25205 808 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 OR1D2P34982 312 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 MATKP42679 507 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 ROR1Q01973 937 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 DDR2Q16832 855 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 HADHQ16836 314 aaKnown RBP15.88■□□□□ 0.13
VRK3-207ENST00000594092 LONRF2Q1L5Z9 754 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 GLE1Q53GS7 698 aaKnown RBP15.88■□□□□ 0.13
VRK3-207ENST00000594092 RASIP1Q5U651 963 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 SDHAF4Q5VUM1 108 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 C8orf74Q6P047 294 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 C2orf15Q8WU43 125 aaKnown RBP15.88■□□□□ 0.13
VRK3-207ENST00000594092 IRGQQ8WZA9 623 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 CLSTN3Q9BQT9 956 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 ADAM33Q9BZ11 813 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 MTIF3Q9H2K0 278 aaKnown RBP15.88■□□□□ 0.13
VRK3-207ENST00000594092 CRISPLD1Q9H336 500 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 POPDC2Q9HBU9 364 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 RAB21Q9UL25 225 aa15.88■□□□□ 0.13
VRK3-207ENST00000594092 TLL1O43897 1013 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 FGF18O76093 207 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 ZRANB2O95218 330 aaKnown RBP eCLIP15.87■□□□□ 0.13
VRK3-207ENST00000594092 TRUB2O95900 331 aaKnown RBP15.87■□□□□ 0.13
VRK3-207ENST00000594092 LTFP02788 710 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 FYNP06241 537 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 VPS52Q8N1B4 723 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 EXD1Q8NHP7 514 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 CENPIQ92674 756 aaPredicted RBP15.87■□□□□ 0.13
VRK3-207ENST00000594092 PNKPQ96T60 521 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 ZWILCHQ9H900 591 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 NGRNQ9NPE2 291 aaKnown RBP15.87■□□□□ 0.13
VRK3-207ENST00000594092 KLHL11Q9NVR0 708 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 PCSK1NQ9UHG2 260 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 USP18Q9UMW8 372 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 SLC27A5Q9Y2P5 690 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 GOLGA6L10A0A0M3HER8 536 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 LCHNA4D1U4 455 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 URODP06132 367 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 KRT7P08729 469 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 HAPLN1P10915 354 aaPredicted RBP15.87■□□□□ 0.13
VRK3-207ENST00000594092 DESP17661 470 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 NOS2P35228 1153 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 BRD3Q15059 726 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 DCAF6Q58WW2 860 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 COL13A1Q5TAT6 717 aaPredicted RBP15.87■□□□□ 0.13
VRK3-207ENST00000594092 CYP4V2Q6ZWL3 525 aaPredicted RBP15.87■□□□□ 0.13
VRK3-207ENST00000594092 NT5C3BQ969T7 300 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 PEBP4Q96S96 227 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 TBCBQ99426 244 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 LRRC1Q9BTT6 524 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 AP1M1Q9BXS5 423 aa15.87■□□□□ 0.13
VRK3-207ENST00000594092 DDX56Q9NY93 547 aaKnown RBP15.87■□□□□ 0.13
VRK3-207ENST00000594092 SOAT2O75908 522 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 KRT1P04264 644 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 HDAC4P56524 1084 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 KRT17Q04695 432 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 DUSP4Q13115 394 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 SMTNL2Q2TAL5 461 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 SLC25A52Q3SY17 297 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 MGAT5BQ3V5L5 792 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 KCNT1Q5JUK3 1230 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 ZFYVE27Q5T4F4 411 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 SYPL2Q5VXT5 272 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 WDR93Q6P2C0 686 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 SLC13A5Q86YT5 568 aaPredicted RBP15.86■□□□□ 0.13
VRK3-207ENST00000594092 RCOR2Q8IZ40 523 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 NUP93Q8N1F7 819 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 KLHL23Q8NBE8 558 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 STKLD1Q8NE28 680 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 AUTS2Q8WXX7 1259 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 RUBCNQ92622 972 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 ACSF2Q96CM8 615 aaPredicted RBP15.86■□□□□ 0.13
VRK3-207ENST00000594092 KRT12Q99456 494 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 SEPT5Q99719 369 aaPredicted RBP15.86■□□□□ 0.13
VRK3-207ENST00000594092 NCAPGQ9BPX3 1015 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 NAALADL1Q9UQQ1 740 aa15.86■□□□□ 0.13
VRK3-207ENST00000594092 CCDC151A5D8V7 595 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 PI4K2BG5E9Z4 385 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 PRPSAP2O60256 369 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 RARAP10276 462 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 SULT1E1P49888 294 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 CLCN6P51797 869 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 PITX1P78337 314 aaPredicted RBP15.85■□□□□ 0.13
VRK3-207ENST00000594092 IFRD2Q12894 506 aaPredicted RBP15.85■□□□□ 0.13
VRK3-207ENST00000594092 LLGL1Q15334 1064 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 OTUD1Q5VV17 481 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms