RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 MESP2Q0VG99 397 aa24■■□□□ 1.43
SSBP4-203ENST00000593641 GRAMD1CQ8IYS0 662 aa24■■□□□ 1.43
SSBP4-203ENST00000593641 CCSER2Q9H7U1 834 aa24■■□□□ 1.43
SSBP4-203ENST00000593641 TMEM9BQ9NQ34 198 aa24■■□□□ 1.43
SSBP4-203ENST00000593641 GMIPQ9P107 970 aa24■■□□□ 1.43
SSBP4-203ENST00000593641 CEP192Q8TEP8 1941 aa24■■□□□ 1.43
SSBP4-203ENST00000593641 TNRC6BQ9UPQ9 1833 aaKnown RBP23.99■■□□□ 1.43
SSBP4-203ENST00000593641 TBC1D3BA6NDS4 549 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 MAP3K13O43283 966 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 C4BPAP04003 597 aaKnown RBP23.99■■□□□ 1.43
SSBP4-203ENST00000593641 TRIM21P19474 475 aaKnown RBP23.99■■□□□ 1.43
SSBP4-203ENST00000593641 ATL3Q6DD88 541 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 NUDT18Q6ZVK8 323 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 PAQR9Q6ZVX9 377 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 LPCAT2Q7L5N7 544 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 TRMT11Q7Z4G4 463 aaKnown RBP23.99■■□□□ 1.43
SSBP4-203ENST00000593641 ACOT1Q86TX2 421 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 FUKQ8N0W3 1084 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 PGBD3Q8N328 593 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 OLIG1Q8TAK6 271 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 PIGKQ92643 395 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 IL37Q9NZH6 218 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 CFAP45Q9UL16 551 aa23.99■■□□□ 1.43
SSBP4-203ENST00000593641 HOXC11O43248 304 aaPredicted RBP23.98■■□□□ 1.43
SSBP4-203ENST00000593641 ZDHHC11BP0C7U3 371 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 IRF1P10914 325 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 P2RY2P41231 377 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 BYSLQ13895 437 aaKnown RBP23.98■■□□□ 1.43
SSBP4-203ENST00000593641 SGSM1Q2NKQ1 1148 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 ANO4Q32M45 955 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 EMC10Q5UCC4 262 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 SLC9A9Q8IVB4 645 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 HSCBQ8IWL3 235 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 BBS7Q8IWZ6 715 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 NAT16Q8N8M0 369 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 KIAA0895Q8NCT3 520 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 HMGB4Q8WW32 186 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 RLN3Q8WXF3 142 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 SNX21Q969T3 373 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 ELMO3Q96BJ8 720 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 DUSP9Q99956 384 aaKnown RBP23.98■■□□□ 1.43
SSBP4-203ENST00000593641 SDCBP2Q9H190 292 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 FBXO44Q9H4M3 255 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 ZDHHC4Q9NPG8 344 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 DEC1Q9P2X7 70 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 SERTAD1Q9UHV2 236 aa23.98■■□□□ 1.43
SSBP4-203ENST00000593641 TCRBV21S2A2A0A5A6 115 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 FAM92AA1XBS5 289 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 PATE3B3GLJ2 98 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 TLR5O60602 858 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 TULP3O75386 442 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 VNN1O95497 513 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 RPN1P04843 607 aaKnown RBP23.97■■□□□ 1.43
SSBP4-203ENST00000593641 SLFN14P0C7P3 912 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 CCDC130P13994 396 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 STK4Q13043 487 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 ETFBKMTQ8IXQ9 262 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 PHTF2Q8N3S3 785 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 SLC2A14Q8TDB8 520 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 TAF4BQ92750 862 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 TLR8Q9NR97 1041 aaKnown RBP23.97■■□□□ 1.43
SSBP4-203ENST00000593641 SPHK2Q9NRA0 654 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 DMAC2Q9NW81 257 aa23.97■■□□□ 1.43
SSBP4-203ENST00000593641 KLRC4O43908 158 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 ADAM23O75077 832 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 NR3C1P04150 777 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 CHRM1P11229 460 aaPredicted RBP23.96■■□□□ 1.43
SSBP4-203ENST00000593641 NDST1P52848 882 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 MAP3K7CLP57077 242 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 GOLGA8FQ08AF8 430 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 GOLGA8DPQ0D2H9 430 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 ORC1Q13415 861 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 ZACNQ401N2 412 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 UNC93AQ86WB7 457 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 ZNF513Q8N8E2 541 aaPredicted RBP23.96■■□□□ 1.43
SSBP4-203ENST00000593641 KCNV2Q8TDN2 545 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 TMEM174Q8WUU8 243 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 FRMD4BQ9Y2L6 1034 aa23.96■■□□□ 1.43
SSBP4-203ENST00000593641 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 PIK3CAP42336 1068 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 DPP6P42658 865 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 DLG4P78352 724 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 IRX4P78413 519 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 LMAN2Q12907 356 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 KMT5BQ4FZB7 885 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 TRIM61Q5EBN2 209 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 C10orf76Q5T2E6 689 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 SH3PXD2AQ5TCZ1 1133 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 CEP135Q66GS9 1140 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 ARMCX6Q7L4S7 300 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 TMEFF1Q8IYR6 380 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 TERB1Q8NA31 727 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 ZMIZ2Q8NF64 920 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 PAGE5Q96GU1 130 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 SMOQ99835 787 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 NUSAP1Q9BXS6 441 aaKnown RBP23.95■■□□□ 1.42
SSBP4-203ENST00000593641 KCTD10Q9H3F6 313 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 CSNK1G1Q9HCP0 422 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 FAM49BQ9NUQ9 324 aa23.95■■□□□ 1.42
SSBP4-203ENST00000593641 EVLQ9UI08 416 aaPredicted RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms