RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ORC1Q13415 861 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 KNOP1Q1ED39 458 aaKnown RBP17.34■□□□□ 0.37
LIG1-205ENST00000593425 MAP7D1Q3KQU3 841 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 FOXD4L6Q3SYB3 417 aaPredicted RBP17.34■□□□□ 0.37
LIG1-205ENST00000593425 TRIM61Q5EBN2 209 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 ZNF667Q5HYK9 610 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 SNX30Q5VWJ9 437 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 FOXD4L3Q6VB84 417 aaPredicted RBP17.34■□□□□ 0.37
LIG1-205ENST00000593425 GRAMD1CQ8IYS0 662 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 ZMIZ2Q8NF64 920 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 PARD3BQ8TEW8 1205 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 SMARCD1Q96GM5 515 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 SPACA7Q96KW9 195 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 ATXN2Q99700 1313 aaKnown RBP17.34■□□□□ 0.37
LIG1-205ENST00000593425 KRT82Q9NSB4 513 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 TMEM74BQ9NUR3 256 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 CGNQ9P2M7 1197 aaKnown RBP17.34■□□□□ 0.37
LIG1-205ENST00000593425 HMGXB4Q9UGU5 601 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 EVLQ9UI08 416 aaPredicted RBP17.34■□□□□ 0.37
LIG1-205ENST00000593425 HCN2Q9UL51 889 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 SH3BP1Q9Y3L3 701 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 FAM92AA1XBS5 289 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 C1QTNF9BB2RNN3 333 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 TRIM24O15164 1050 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 HOXC11O43248 304 aaPredicted RBP17.33■□□□□ 0.36
LIG1-205ENST00000593425 TULP3O75386 442 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 AP1G2O75843 785 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 BEST1O76090 585 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 TOP3BO95985 862 aaKnown RBP17.33■□□□□ 0.36
LIG1-205ENST00000593425 C4BPAP04003 597 aaKnown RBP17.33■□□□□ 0.36
LIG1-205ENST00000593425 C1QTNF9P0C862 333 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 IRF1P10914 325 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 CCDC130P13994 396 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 SPINK2P20155 84 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 TNFRSF4P43489 277 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 FOXC1Q12948 553 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 NCOA4Q13772 614 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 UAP1L1Q3KQV9 507 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 LPCAT2Q7L5N7 544 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 ACOT1Q86TX2 421 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 OTUB2Q96DC9 234 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 TNIP3Q96KP6 325 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 SMOQ99835 787 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 SPHK2Q9NRA0 654 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 WASF3Q9UPY6 502 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 ADAMTS9Q9P2N4 1935 aa17.33■□□□□ 0.36
LIG1-205ENST00000593425 PVALEFA0A1B0GWK0 134 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 TBC1D3BA6NDS4 549 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 MAP3K13O43283 966 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 PROS1P07225 676 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 CSRP1P21291 193 aaKnown RBP17.32■□□□□ 0.36
LIG1-205ENST00000593425 TUBP50607 506 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 DLG4P78352 724 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 CLDN10P78369 228 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 ANO4Q32M45 955 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 TMEM25Q86YD3 366 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 PGBD3Q8N328 593 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 ZNF513Q8N8E2 541 aaPredicted RBP17.32■□□□□ 0.36
LIG1-205ENST00000593425 TERB1Q8NA31 727 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 KIAA0895Q8NCT3 520 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 PCDHA7Q9UN72 937 aa17.32■□□□□ 0.36
LIG1-205ENST00000593425 MYO18AQ92614 2054 aaKnown RBP17.32■□□□□ 0.36
LIG1-205ENST00000593425 KLRC4O43908 158 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 CEACAM1P13688 526 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 GABRG2P18507 467 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 WASP42768 502 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 MAPK8P45983 427 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 AP3M2P53677 418 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 C10orf76Q5T2E6 689 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 RESP18Q5W5W9 173 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 BTBD8Q5XKL5 378 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 UNQ6494/PRO21346Q6UXR6 183 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 MIB1Q86YT6 1006 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 SYT12Q8IV01 421 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 DEFB124Q8NES8 71 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 SLC2A14Q8TDB8 520 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 DUSP9Q99956 384 aaKnown RBP17.31■□□□□ 0.36
LIG1-205ENST00000593425 CSNK1G1Q9HCP0 422 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 FSCN3Q9NQT6 498 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 DMAC2Q9NW81 257 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 COMMD8Q9NX08 183 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 DEC1Q9P2X7 70 aa17.31■□□□□ 0.36
LIG1-205ENST00000593425 PCDH15Q96QU1 1955 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 GREM1O60565 184 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 TLR5O60602 858 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 HOXB2P14652 356 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 ENGP17813 658 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 ITPKAP23677 461 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 NDST1P52848 882 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 MAP3K7CLP57077 242 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 LMAN2Q12907 356 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 STK4Q13043 487 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 PEAR1Q5VY43 1037 aaPredicted RBP17.3■□□□□ 0.36
LIG1-205ENST00000593425 LYSMD4Q5XG99 296 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 SPOPLQ6IQ16 392 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 GPRIN1Q7Z2K8 1008 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 C12orf29Q8N999 325 aa17.3■□□□□ 0.36
LIG1-205ENST00000593425 TMEM121BQ9BXQ6 578 aaPredicted RBP17.3■□□□□ 0.36
LIG1-205ENST00000593425 NUSAP1Q9BXS6 441 aaKnown RBP17.3■□□□□ 0.36
LIG1-205ENST00000593425 NACA2Q9H009 215 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms