RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 LRRC46Q96FV0 321 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 SLITRK6Q9H5Y7 841 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 SERTAD4Q9NUC0 356 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 ASB6Q9NWX5 421 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 USP22Q9UPT9 525 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 AKNAQ7Z591 1439 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 APOL1O14791 398 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 CD3EAPO15446 510 aaKnown RBP5.81□□□□□ -1.48
SMAD4-216ENST00000593223 IFIT2P09913 472 aaKnown RBP5.81□□□□□ -1.48
SMAD4-216ENST00000593223 FAM163BP0C2L3 166 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 ELFN1P0C7U0 828 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 TSHRP16473 764 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 ENGP17813 658 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 EPHA3P29320 983 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 PTH2RP49190 550 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 INHBEP58166 350 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 HTRA4P83105 476 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-216ENST00000593223 ZNF750Q32MQ0 723 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 PLAG1Q6DJT9 500 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 FCRL6Q6DN72 434 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 NME8Q8N427 588 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 CCDC150Q8NCX0 1101 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 ZBTB45Q96K62 511 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-216ENST00000593223 CCDC138Q96M89 665 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 MYD88Q99836 296 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 TRIM5Q9C035 493 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 KLK15Q9H2R5 256 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 FAM83DQ9H4H8 585 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 STARD7Q9NQZ5 370 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 C11orf21Q9P2W6 132 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 PHTF1Q9UMS5 762 aa5.81□□□□□ -1.48
SMAD4-216ENST00000593223 DLDP09622 509 aaKnown RBP5.8□□□□□ -1.48
SMAD4-216ENST00000593223 HGFP14210 728 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 GPD1P21695 349 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 FGFR2P21802 821 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 TNFSF4P23510 183 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 UQCRC1P31930 480 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 PGDP52209 483 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 EEFSECP57772 596 aaKnown RBP5.8□□□□□ -1.48
SMAD4-216ENST00000593223 KCNAB1Q14722 419 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 ANKRD16Q6P6B7 361 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 PARS2Q7L3T8 475 aaKnown RBP5.8□□□□□ -1.48
SMAD4-216ENST00000593223 BEND5Q7L4P6 421 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 WDR53Q7Z5U6 358 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-216ENST00000593223 DPP9Q86TI2 863 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 TXLNBQ8N3L3 684 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 SOCS4Q8WXH5 440 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 RIPOR3Q96MK2 946 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 UROC1Q96N76 676 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 HEYLQ9NQ87 328 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-216ENST00000593223 DRG1Q9Y295 367 aaKnown RBP5.8□□□□□ -1.48
SMAD4-216ENST00000593223 CEP83Q9Y592 693 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 ENTPD2Q9Y5L3 495 aa5.8□□□□□ -1.48
SMAD4-216ENST00000593223 A1BGP04217 495 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 PRKCBP05771 671 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 JUPP14923 745 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 CLK3P49761 638 aaKnown RBP5.79□□□□□ -1.48
SMAD4-216ENST00000593223 GATMP50440 423 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 HDAC1Q13547 482 aaPredicted RBP5.79□□□□□ -1.48
SMAD4-216ENST00000593223 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 TBC1D25Q3MII6 688 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 PCID2Q5JVF3 399 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 FAM209BQ5JX69 171 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 MZT2AQ6P582 158 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 RAB11FIP4Q86YS3 637 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 ACRBPQ8NEB7 543 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 INO80BQ9C086 356 aaPredicted RBP5.79□□□□□ -1.48
SMAD4-216ENST00000593223 GJB4Q9NTQ9 266 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 DLL3Q9NYJ7 618 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 DKK4Q9UBT3 224 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 PADI4Q9UM07 663 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 HPSEQ9Y251 543 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 TRAPPC8Q9Y2L5 1435 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 CPS1P31327 1500 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 LRRC7Q96NW7 1537 aa5.79□□□□□ -1.48
SMAD4-216ENST00000593223 SPATA31A6Q5VVP1 1343 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 SHANK2Q9UPX8 1470 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 RASA4BC9J798 803 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 H0YIZ8 118 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 RASA4O43374 803 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 NCK2O43639 380 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 SNX2O60749 519 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 NPSP0C0P6 89 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 DRD4P21917 467 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 PCSK6P29122 969 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 ELLP55199 621 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-216ENST00000593223 SMN1Q16637 294 aaKnown RBP5.78□□□□□ -1.48
SMAD4-216ENST00000593223 ARL13BQ3SXY8 428 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 ZNF362Q5T0B9 420 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-216ENST00000593223 SYCP2LQ5T4T6 812 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 HIBCHQ6NVY1 386 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-216ENST00000593223 FBXO42Q6P3S6 717 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 DPY19L3Q6ZPD9 716 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 SLC29A4Q7RTT9 530 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 ZNF804AQ7Z570 1209 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 AMIGO2Q86SJ2 522 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 SRLQ86TD4 932 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 RNF152Q8N8N0 203 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 BOLLQ8N9W6 283 aaKnown RBP5.78□□□□□ -1.48
SMAD4-216ENST00000593223 FANCBQ8NB91 859 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms