RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 POLR3BQ9NW08 1133 aaPredicted RBP24.61■■□□□ 1.53
MBD3-211ENST00000592965 MYO18AQ92614 2054 aaKnown RBP24.6■■□□□ 1.53
MBD3-211ENST00000592965 STX10O60499 249 aa24.6■■□□□ 1.53
MBD3-211ENST00000592965 APBB3O95704 486 aa24.6■■□□□ 1.53
MBD3-211ENST00000592965 PRCPP42785 496 aa24.6■■□□□ 1.53
MBD3-211ENST00000592965 DMC1Q14565 340 aa24.6■■□□□ 1.53
MBD3-211ENST00000592965 ZNF658Q5TYW1 1059 aaPredicted RBP24.6■■□□□ 1.53
MBD3-211ENST00000592965 RHBDF2Q6PJF5 856 aa24.6■■□□□ 1.53
MBD3-211ENST00000592965 TTC39CQ8N584 583 aa24.6■■□□□ 1.53
MBD3-211ENST00000592965 USP33Q8TEY7 942 aa24.6■■□□□ 1.53
MBD3-211ENST00000592965 CYFIP2Q96F07 1278 aa24.6■■□□□ 1.53
MBD3-211ENST00000592965 EEF2KMTQ96G04 330 aa24.6■■□□□ 1.53
MBD3-211ENST00000592965 TLR8Q9NR97 1041 aaKnown RBP24.6■■□□□ 1.53
MBD3-211ENST00000592965 SCML2Q9UQR0 700 aa24.6■■□□□ 1.53
MBD3-211ENST00000592965 HHLA1C9JL84 531 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 K7EQS6 105 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 TLR5O60602 858 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 SMC2O95347 1197 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 ADH5P11766 374 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 CD58P19256 250 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 PGFP49763 221 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 GPRIN1Q7Z2K8 1008 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 CACNA2D4Q7Z3S7 1137 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 ZC3H3Q8IXZ2 948 aaKnown RBP24.59■■□□□ 1.53
MBD3-211ENST00000592965 FBXL13Q8NEE6 735 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 SPATA20Q8TB22 786 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 SEMA4DQ92854 862 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 LOXL4Q96JB6 756 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 FAM124BQ9H5Z6 455 aaPredicted RBP24.59■■□□□ 1.53
MBD3-211ENST00000592965 CYLDQ9NQC7 956 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 SEMA4GQ9NTN9 838 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 EBF1Q9UH73 591 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 SH3BP1Q9Y3L3 701 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 PCDHA5Q9Y5H7 936 aa24.59■■□□□ 1.53
MBD3-211ENST00000592965 AXIN1O15169 862 aa24.58■■□□□ 1.53
MBD3-211ENST00000592965 SLC16A3O15427 465 aaKnown RBP24.58■■□□□ 1.53
MBD3-211ENST00000592965 CSRP2Q16527 193 aa24.58■■□□□ 1.53
MBD3-211ENST00000592965 TIGD1Q96MW7 591 aa24.58■■□□□ 1.53
MBD3-211ENST00000592965 PNKPQ96T60 521 aa24.58■■□□□ 1.53
MBD3-211ENST00000592965 TSG101Q99816 390 aa24.58■■□□□ 1.53
MBD3-211ENST00000592965 GTPBP4Q9BZE4 634 aaKnown RBP24.58■■□□□ 1.53
MBD3-211ENST00000592965 NACA2Q9H009 215 aa24.58■■□□□ 1.53
MBD3-211ENST00000592965 CDV3Q9UKY7 258 aaKnown RBP24.58■■□□□ 1.53
MBD3-211ENST00000592965 CCDC192P0DO97 292 aa24.57■■□□□ 1.52
MBD3-211ENST00000592965 LY6G5CQ5SRR4 150 aa24.57■■□□□ 1.52
MBD3-211ENST00000592965 C12orf40Q86WS4 652 aa24.57■■□□□ 1.52
MBD3-211ENST00000592965 RAB20Q9NX57 234 aa24.57■■□□□ 1.52
MBD3-211ENST00000592965 CNOT1A5YKK6 2376 aaKnown RBP24.56■■□□□ 1.52
MBD3-211ENST00000592965 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.56■■□□□ 1.52
MBD3-211ENST00000592965 CYP26A1O43174 497 aa24.56■■□□□ 1.52
MBD3-211ENST00000592965 HOXC11O43248 304 aaPredicted RBP24.56■■□□□ 1.52
MBD3-211ENST00000592965 FOXD2O60548 495 aaPredicted RBP24.56■■□□□ 1.52
MBD3-211ENST00000592965 KAT7O95251 611 aa24.56■■□□□ 1.52
MBD3-211ENST00000592965 CHRM1P11229 460 aaPredicted RBP24.56■■□□□ 1.52
MBD3-211ENST00000592965 SLC6A11P48066 632 aa24.56■■□□□ 1.52
MBD3-211ENST00000592965 MRPS21P82921 87 aaKnown RBP24.56■■□□□ 1.52
MBD3-211ENST00000592965 C2orf27AQ580R0 203 aa24.56■■□□□ 1.52
MBD3-211ENST00000592965 KBTBD6Q86V97 674 aa24.56■■□□□ 1.52
MBD3-211ENST00000592965 BBS7Q8IWZ6 715 aa24.56■■□□□ 1.52
MBD3-211ENST00000592965 SMARCE1Q969G3 411 aa24.56■■□□□ 1.52
MBD3-211ENST00000592965 JAKMIP2Q96AA8 810 aa24.56■■□□□ 1.52
MBD3-211ENST00000592965 ZC3H10Q96K80 434 aaKnown RBP24.56■■□□□ 1.52
MBD3-211ENST00000592965 DUSP16Q9BY84 665 aa24.56■■□□□ 1.52
MBD3-211ENST00000592965 HOOK1Q9UJC3 728 aaKnown RBP24.56■■□□□ 1.52
MBD3-211ENST00000592965 MMP17Q9ULZ9 603 aa24.56■■□□□ 1.52
MBD3-211ENST00000592965 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.56■■□□□ 1.52
MBD3-211ENST00000592965 A0A0A0MRY4 1105 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 EPN2O95208 641 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 APODP05090 189 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 ACO1P21399 889 aaKnown RBP24.55■■□□□ 1.52
MBD3-211ENST00000592965 KIF11P52732 1056 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 SEC13P55735 322 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 FKBP3Q00688 224 aaKnown RBP24.55■■□□□ 1.52
MBD3-211ENST00000592965 GAD2Q05329 585 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 LRRC63Q05C16 580 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 MESP2Q0VG99 397 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 KLHDC10Q6PID8 442 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 PRR23CQ6ZRP0 262 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 PHTF2Q8N3S3 785 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 TSTD1Q8NFU3 115 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 WBP2Q969T9 261 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 ARHGEF4Q9NR80 690 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 CISHQ9NSE2 258 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 OSER1Q9NX31 292 aa24.55■■□□□ 1.52
MBD3-211ENST00000592965 LAMA1P25391 3075 aa24.54■■□□□ 1.52
MBD3-211ENST00000592965 GREM1O60565 184 aa24.54■■□□□ 1.52
MBD3-211ENST00000592965 IRF1P10914 325 aa24.54■■□□□ 1.52
MBD3-211ENST00000592965 GRIA2P42262 883 aa24.54■■□□□ 1.52
MBD3-211ENST00000592965 ATXN1P54253 815 aaKnown RBP24.54■■□□□ 1.52
MBD3-211ENST00000592965 PMS1P54277 932 aaKnown RBP24.54■■□□□ 1.52
MBD3-211ENST00000592965 HSF5Q4G112 596 aaPredicted RBP24.54■■□□□ 1.52
MBD3-211ENST00000592965 PPP1R26Q5T8A7 1209 aaPredicted RBP24.54■■□□□ 1.52
MBD3-211ENST00000592965 ANKRD40Q6AI12 368 aa24.54■■□□□ 1.52
MBD3-211ENST00000592965 SFTPA1Q8IWL2 248 aa24.54■■□□□ 1.52
MBD3-211ENST00000592965 ETFBKMTQ8IXQ9 262 aa24.54■■□□□ 1.52
MBD3-211ENST00000592965 NETO1Q8TDF5 533 aa24.54■■□□□ 1.52
MBD3-211ENST00000592965 ARID3AQ99856 593 aa24.54■■□□□ 1.52
MBD3-211ENST00000592965 RTKNQ9BST9 563 aa24.54■■□□□ 1.52
MBD3-211ENST00000592965 KLF16Q9BXK1 252 aaPredicted RBP24.54■■□□□ 1.52
MBD3-211ENST00000592965 NMUR1Q9HB89 426 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms