RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 ASIC3Q9UHC3 531 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 HSPA6P17066 643 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 ATICP31939 592 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 HNRNPFP52597 415 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 FOLH1Q04609 750 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 HSPA14Q0VDF9 509 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 EFTUD2Q15029 972 aaKnown RBP eCLIP12.7□□□□□ -0.387e-7■■■■■ 38.1
SMARCA4-217ENST00000591595 TMEM179Q6ZVK1 233 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 CYP2U1Q7Z449 544 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 SLC51BQ86UW2 128 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 TNIP2Q8NFZ5 429 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 CERKQ8TCT0 537 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 ATL1Q8WXF7 558 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 COQ7Q99807 217 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 SH2D3AQ9BRG2 576 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 HAUS8Q9BT25 410 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 TRIM55Q9BYV6 548 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 FANCEQ9HB96 536 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 ACP6Q9NPH0 428 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 ARL8BQ9NVJ2 186 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 ZMYM2Q9UBW7 1377 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 A8MU76 341 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 TISP43B9A030 160 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 ESRRBO95718 433 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 SLC1A1P43005 524 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 CDK9P50750 372 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 DLG4P78352 724 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 ZDHHC24Q6UX98 284 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 PRR23CQ6ZRP0 262 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 RIPOR1Q6ZS17 1223 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 OTOP1Q7RTM1 612 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 RAB3IL1Q8TBN0 382 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 HELQQ8TDG4 1101 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 HSD17B14Q9BPX1 270 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 ZSWIM1Q9BR11 485 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 ZNF577Q9BSK1 485 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 TUBB6Q9BUF5 446 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 SLCO1B3Q9NPD5 702 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 TAS2R1Q9NYW7 299 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 TNRC6CQ9HCJ0 1690 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 FOXO6A8MYZ6 492 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 RIPK2O43353 540 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 CTRB1P17538 263 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 KRT6CP48668 564 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 RPL26P61254 145 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 XIAPP98170 497 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 ZYXQ15942 572 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 TRMT5Q32P41 509 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 ITPRIPL1Q6GPH6 555 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 CTRB2Q6GPI1 263 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 RWDD4Q6NW29 188 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 CCDC62Q6P9F0 684 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 LPCAT2Q7L5N7 544 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 CRYGNQ8WXF5 182 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 PTCD3Q96EY7 689 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 MRPL9Q9BYD2 267 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 ROPN1BQ9BZX4 212 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 ROPN1Q9HAT0 212 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 TUFT1Q9NNX1 390 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 UBN1Q9NPG3 1134 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 TBC1D14Q9P2M4 693 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 ATPIF1Q9UII2 106 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 NEU2Q9Y3R4 380 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 WDR91A4D1P6 747 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 KRBA1A5PL33 1030 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 FAM25EA8MYX2 175 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 CIB2O75838 187 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 CIITAP33076 1130 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 PRELPP51888 382 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 RGS21Q2M5E4 152 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 LPCAT4Q643R3 524 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 HHIPL2Q6UWX4 724 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 DHDDSQ86SQ9 333 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 GLMNQ92990 594 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 KAT5Q92993 513 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 TAMM41Q96BW9 452 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 NSL1Q96IY1 281 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 WDR18Q9BV38 432 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 KCNQ5Q9NR82 932 aa12.69□□□□□ -0.38
SMARCA4-217ENST00000591595 TCRBV7S2A1N4TA0A589 114 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 SYCE1LA8MT33 242 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 CENPBD1B2RD01 187 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 TNFAIP8O95379 198 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 RBP3P10745 1247 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 PRKACAP17612 351 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 CCNCP24863 283 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 PMLP29590 882 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 RAP1GDS1P52306 607 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 TRIP13Q15645 432 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 CEP78Q5JTW2 689 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 TTC27Q6P3X3 843 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 ARHGEF19Q8IW93 802 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 SP8Q8IXZ3 490 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 CAPSLQ8WWF8 208 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 SPOCK2Q92563 424 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 CIB1Q99828 191 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 LXNQ9BS40 222 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 GPR88Q9GZN0 384 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 WDR6Q9NNW5 1121 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms