RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TBC1D7Q9P0N9 293 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 HOOK1Q9UJC3 728 aaKnown RBP10.06□□□□□ -0.8
BRCA1-226ENST00000591534 A6NJY4 79 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 KHNYNO15037 678 aaKnown RBP10.05□□□□□ -0.8
BRCA1-226ENST00000591534 KRT37O76014 449 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 TIMP2P16035 220 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 MRPS21P82921 87 aaKnown RBP10.05□□□□□ -0.8
BRCA1-226ENST00000591534 CYP27A1Q02318 531 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 CCDC6Q16204 474 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 SOWAHAQ2M3V2 549 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 HSF5Q4G112 596 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-226ENST00000591534 N4BP2L1Q5TBK1 243 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-226ENST00000591534 SDHAF4Q5VUM1 108 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 TDRD10Q5VZ19 366 aaKnown RBP10.05□□□□□ -0.8
BRCA1-226ENST00000591534 PKN3Q6P5Z2 889 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 FAM171BQ6P995 826 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 WDR49Q8IV35 697 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 ARL14EPQ8N8R7 260 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-226ENST00000591534 HPS1Q92902 700 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 DNAJC19Q96DA6 116 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 SPACA7Q96KW9 195 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 SLITRK1Q96PX8 696 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 FNBP1Q96RU3 617 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 CYP2S1Q96SQ9 504 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 MMS19Q96T76 1030 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 PKMYT1Q99640 499 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 EDEM2Q9BV94 578 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 PANK2Q9BZ23 570 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 MTMR12Q9C0I1 747 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 DUSP15Q9H1R2 295 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-226ENST00000591534 IKZF4Q9H2S9 585 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 PCIF1Q9H4Z3 704 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 PDE11AQ9HCR9 933 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 INTS13Q9NVM9 706 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 WNT6Q9Y6F9 365 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 EPG5Q9HCE0 2579 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 ACACBO00763 2458 aa10.05□□□□□ -0.8
BRCA1-226ENST00000591534 TCHHQ07283 1943 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 FRMD3A2A2Y4 597 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 BCLAF3A2AJT9 711 aaKnown RBP10.04□□□□□ -0.8
BRCA1-226ENST00000591534 GOLGA8IPA6NC78 632 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 GOLGA8JA6NMD2 632 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-226ENST00000591534 MEN1O00255 615 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 TM4SF5O14894 197 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 PPP6R2O75170 966 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 KCNK5O95279 499 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 WARSP23381 471 aaKnown RBP10.04□□□□□ -0.8
BRCA1-226ENST00000591534 BDNFP23560 247 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 PMLP29590 882 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 GNL1P36915 607 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-226ENST00000591534 EIF2DP41214 584 aaKnown RBP10.04□□□□□ -0.8
BRCA1-226ENST00000591534 PTGIRP43119 386 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 NASPP49321 788 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-226ENST00000591534 SNRPFP62306 86 aaKnown RBP10.04□□□□□ -0.8
BRCA1-226ENST00000591534 TNNC1P63316 161 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 NOP14P78316 857 aaKnown RBP10.04□□□□□ -0.8
BRCA1-226ENST00000591534 SLC39A14Q15043 492 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 STK38Q15208 465 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 NFKBIBQ15653 356 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 Q6ZNB5 142 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 Q6ZVU0 165 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 SLC9A9Q8IVB4 645 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 STKLD1Q8NE28 680 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 PDZD8Q8NEN9 1154 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 MYCBPAPQ8TBZ2 947 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 CNOT6LQ96LI5 555 aaKnown RBP10.04□□□□□ -0.8
BRCA1-226ENST00000591534 CBWD1Q9BRT8 395 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 TNMDQ9H2S6 317 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 CUEDC2Q9H467 287 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 FBRSL1Q9HCM7 1045 aaKnown RBP10.04□□□□□ -0.8
BRCA1-226ENST00000591534 POLMQ9NP87 494 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-226ENST00000591534 GCNT4Q9P109 453 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 TBC1D14Q9P2M4 693 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 NUP210Q8TEM1 1887 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-226ENST00000591534 ATP8B3O60423 1300 aa10.04□□□□□ -0.8
BRCA1-226ENST00000591534 TPRP12270 2363 aaKnown RBP10.03□□□□□ -0.8
BRCA1-226ENST00000591534 C2orf78A6NCI8 922 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 LEFTY2O00292 366 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 TADA3O75528 432 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 APODP05090 189 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 PDGFRBP09619 1106 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 TNNI1P19237 187 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 TRIM21P19474 475 aaKnown RBP10.03□□□□□ -0.8
BRCA1-226ENST00000591534 NOVA1P51513 510 aaKnown RBP10.03□□□□□ -0.8
BRCA1-226ENST00000591534 SLC7A9P82251 487 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 LMAN2Q12907 356 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 TRPC3Q13507 836 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 TLR1Q15399 786 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 C2orf27AQ580R0 203 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 SPDYCQ5MJ68 293 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 EOGTQ5NDL2 527 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 BTBD8Q5XKL5 378 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 LPCAT2Q7L5N7 544 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 HS2ST1Q7LGA3 356 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 TRMT11Q7Z4G4 463 aaKnown RBP10.03□□□□□ -0.8
BRCA1-226ENST00000591534 LINC00301Q8NCQ3 95 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 OR6B3Q8NGW1 331 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 CXorf38Q8TB03 319 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 USP33Q8TEY7 942 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms