RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 TRPC3Q13507 836 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 UAP1L1Q3KQV9 507 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 HECTD3Q5T447 861 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 UNC13DQ70J99 1090 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 TMEM25Q86YD3 366 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 MIB1Q86YT6 1006 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 SYT12Q8IV01 421 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 C12orf56Q8IXR9 622 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 FUKQ8N0W3 1084 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 PDZD8Q8NEN9 1154 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 OTUB2Q96DC9 234 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 DUSP9Q99956 384 aaKnown RBP17.16■□□□□ 0.34
RAB3D-202ENST00000589655 BLZF1Q9H2G9 400 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 GMIPQ9P107 970 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 CIZ1Q9ULV3 898 aaPredicted RBP17.16■□□□□ 0.34
RAB3D-202ENST00000589655 FAM208BQ5VWN6 2430 aa17.16■□□□□ 0.34
RAB3D-202ENST00000589655 PCNX2A6NKB5 2137 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 ASPMQ8IZT6 3477 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.15■□□□□ 0.34
RAB3D-202ENST00000589655 BEST1O76090 585 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 VNN1O95497 513 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 ENGP17813 658 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 ITPKAP23677 461 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 SNRPFP62306 86 aaKnown RBP17.15■□□□□ 0.34
RAB3D-202ENST00000589655 AMPD3Q01432 767 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 PEAR1Q5VY43 1037 aaPredicted RBP17.15■□□□□ 0.34
RAB3D-202ENST00000589655 IQUBQ8NA54 791 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 KDF1Q8NAX2 398 aaPredicted RBP17.15■□□□□ 0.34
RAB3D-202ENST00000589655 GATA6Q92908 595 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 SYAP1Q96A49 352 aaPredicted RBP17.15■□□□□ 0.34
RAB3D-202ENST00000589655 SPACA7Q96KW9 195 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 SMOQ99835 787 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 CD248Q9HCU0 757 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 SLC39A2Q9NP94 309 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 FSCN3Q9NQT6 498 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 SPHK2Q9NRA0 654 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 BCCIPQ9P287 314 aaKnown RBP eCLIP17.15■□□□□ 0.34
RAB3D-202ENST00000589655 PILRBQ9UKJ0 227 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 ZMIZ1Q9ULJ6 1067 aa17.15■□□□□ 0.34
RAB3D-202ENST00000589655 ZFYVE26Q68DK2 2539 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 CEP192Q8TEP8 1941 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 ADAMTS9Q9P2N4 1935 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 TBC1D3BA6NDS4 549 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 LRRIQ3A6PVS8 624 aaPredicted RBP17.14■□□□□ 0.33
RAB3D-202ENST00000589655 MAP3K13O43283 966 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 C4BPAP04003 597 aaKnown RBP17.14■□□□□ 0.33
RAB3D-202ENST00000589655 GABRG2P18507 467 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 MAPK8P45983 427 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 TUBP50607 506 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 CLDN10P78369 228 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 LMAN2Q12907 356 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 SPDYCQ5MJ68 293 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 SLC23A3Q6PIS1 610 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 SCARA5Q6ZMJ2 495 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 ACOT1Q86TX2 421 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 ZNF513Q8N8E2 541 aaPredicted RBP17.14■□□□□ 0.33
RAB3D-202ENST00000589655 TERB1Q8NA31 727 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 PARD3BQ8TEW8 1205 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 ACOX2Q99424 681 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 SCNM1Q9BWG6 230 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 ADAM33Q9BZ11 813 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 DMAP1Q9NPF5 467 aaPredicted RBP17.14■□□□□ 0.33
RAB3D-202ENST00000589655 HMGXB4Q9UGU5 601 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 SH3BP1Q9Y3L3 701 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 PCDH15Q96QU1 1955 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 CACNA1GO43497 2377 aa17.14■□□□□ 0.33
RAB3D-202ENST00000589655 A0A1W2PQF6 199 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 POLR2DO15514 142 aaKnown RBP17.13■□□□□ 0.33
RAB3D-202ENST00000589655 EXOC3O60645 756 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 CUTAO60888 179 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 IRF1P10914 325 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 CCDC130P13994 396 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 WASP42768 502 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 ORC1Q13415 861 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 CUL4BQ13620 913 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 KNOP1Q1ED39 458 aaKnown RBP17.13■□□□□ 0.33
RAB3D-202ENST00000589655 ZNF699Q32M78 642 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 C10orf76Q5T2E6 689 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 LYSMD4Q5XG99 296 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 PIP4P1Q86T03 277 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 PGBD3Q8N328 593 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 DEFB119Q8N690 84 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 KCNV2Q8TDN2 545 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 SMARCD1Q96GM5 515 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 MED10Q9BTT4 135 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 NUSAP1Q9BXS6 441 aaKnown RBP17.13■□□□□ 0.33
RAB3D-202ENST00000589655 KRT82Q9NSB4 513 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 CALCOCO1Q9P1Z2 691 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 DEC1Q9P2X7 70 aa17.13■□□□□ 0.33
RAB3D-202ENST00000589655 PHACTR2O75167 634 aa17.12■□□□□ 0.33
RAB3D-202ENST00000589655 AP1G2O75843 785 aa17.12■□□□□ 0.33
RAB3D-202ENST00000589655 YEATS4O95619 227 aa17.12■□□□□ 0.33
RAB3D-202ENST00000589655 TBX18O95935 607 aa17.12■□□□□ 0.33
RAB3D-202ENST00000589655 DLG4P78352 724 aa17.12■□□□□ 0.33
RAB3D-202ENST00000589655 SEMA3BQ13214 749 aa17.12■□□□□ 0.33
RAB3D-202ENST00000589655 BIRC3Q13489 604 aa17.12■□□□□ 0.33
RAB3D-202ENST00000589655 NCOA4Q13772 614 aa17.12■□□□□ 0.33
RAB3D-202ENST00000589655 ANO4Q32M45 955 aa17.12■□□□□ 0.33
RAB3D-202ENST00000589655 ZNF667Q5HYK9 610 aa17.12■□□□□ 0.33
RAB3D-202ENST00000589655 EGFLAMQ63HQ2 1017 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms