RNA–Protein interactions for RNA: ENST00000589146.5

CAPNS1-207, Transcript of calpain small subunit 1, humanhuman

TSL 3 BASIC

Gene CAPNS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-207ENST00000589146 DR1Q01658 176 aa23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 CCNG2Q16589 344 aa23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 MAP9Q49MG5 647 aa23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 CTXN3Q4LDR2 81 aa23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 ODF2Q5BJF6 829 aa23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 TTC27Q6P3X3 843 aa23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 BEND5Q7L4P6 421 aa23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 BHLHA9Q7RTU4 235 aa23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 RNF168Q8IYW5 571 aaPredicted RBP23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 FAM71BQ8TC56 605 aa23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 NPY6RQ99463 290 aa23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 POPDC2Q9HBU9 364 aa23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 ZNF446Q9NWS9 450 aa23.81■■□□□ 1.4
CAPNS1-207ENST00000589146 CARNS1A5YM72 827 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 ZNF487B1APH4 448 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 MDM4O15151 490 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 ZMYND10O75800 440 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 UPP2O95045 317 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 ZBED1O96006 694 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 ATP11AP98196 1134 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 GUCY2DQ02846 1103 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 SMARCB1Q12824 385 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 SLC39A12Q504Y0 691 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 RAB6CQ53S08 254 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 ZFYVE27Q5T4F4 411 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 DRICH1Q6PGQ1 229 aaPredicted RBP23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 CCDC137Q6PK04 289 aaKnown RBP23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 VSTM1Q6UX27 236 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 BCL7CQ8WUZ0 217 aaPredicted RBP23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 NDRG1Q92597 394 aaKnown RBP23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 C8orf48Q96LL4 319 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 HEMGNQ9BXL5 484 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 RAB6CQ9H0N0 254 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 EPB41L5Q9HCM4 733 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 NGRNQ9NPE2 291 aaKnown RBP23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 IL23AQ9NPF7 189 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 PRDM5Q9NQX1 630 aaPredicted RBP23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 RRN3Q9NYV6 651 aa23.8■■□□□ 1.4
CAPNS1-207ENST00000589146 TNFRSF10BO14763 440 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 TTI1O43156 1089 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 FYNP06241 537 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 ALDH7A1P49419 539 aaKnown RBP23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 DRG2P55039 364 aaKnown RBP23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 WDR5P61964 334 aaKnown RBP23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 PDK2Q15119 407 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 CDO1Q16878 200 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 SMTNL2Q2TAL5 461 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 KCNT1Q5JUK3 1230 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 COL13A1Q5TAT6 717 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 ANKS3Q6ZW76 656 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 TMEM173Q86WV6 379 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 CMTR2Q8IYT2 770 aaKnown RBP23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 KCTD6Q8NC69 237 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 CASKIN2Q8WXE0 1202 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 FAM149B1Q96BN6 582 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 ACSF2Q96CM8 615 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 FRMD8P1Q9BZ68 369 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 RAB17Q9H0T7 212 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 CHST7Q9NS84 486 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 STAP1Q9ULZ2 295 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 PCDHB5Q9Y5E4 795 aa23.79■■□□□ 1.4
CAPNS1-207ENST00000589146 KIAA0100Q14667 2235 aaKnown RBP23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 OR4Q2P0C623 313 aa23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 TFE3P19532 575 aaPredicted RBP23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 RABGGTBP53611 331 aa23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 CUL1Q13616 776 aa23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 OTUD1Q5VV17 481 aaPredicted RBP23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 HFE2Q6ZVN8 426 aa23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 SYDE1Q6ZW31 735 aaPredicted RBP23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 BBS12Q6ZW61 710 aa23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 JAMLQ86YT9 394 aa23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 PSTKQ8IV42 348 aaKnown RBP23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 AENQ8WTP8 325 aaKnown RBP23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 C1orf54Q8WWF1 131 aa23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 TTPALQ9BTX7 342 aa23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 TRIM62Q9BVG3 475 aa23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 ADAM33Q9BZ11 813 aa23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 PRDM10Q9NQV6 1147 aa23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 FEZ2Q9UHY8 353 aaPredicted RBP23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 RASAL2Q9UJF2 1139 aa23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 R3HDM2Q9Y2K5 976 aaKnown RBP23.78■■□□□ 1.4
CAPNS1-207ENST00000589146 YJEFN3A6XGL0 299 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 NT5C1B-RDH14C9J2C7 533 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 E7ENQ6 273 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 LTFP02788 710 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 USP17L7P0C7H9 530 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 MYBL2P10244 700 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 KRT10P13645 584 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 CYP2F1P24903 491 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 SULT1E1P49888 294 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 DEFB103AP81534 67 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 ADCY2Q08462 1091 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 GPR17Q13304 367 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 LLGL1Q15334 1064 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 RTP2Q5QGT7 225 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 DUPD1Q68J44 220 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 CEP57Q86XR8 500 aa23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 C2orf15Q8WU43 125 aaKnown RBP23.77■■□□□ 1.4
CAPNS1-207ENST00000589146 HSPH1Q92598 858 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms