RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 PTPN1P18031 435 aaKnown RBP16.05■□□□□ 0.16
SF3A2-204ENST00000589118 GARTP22102 1010 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 ABCD1P33897 745 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 RDXP35241 583 aaKnown RBP16.05■□□□□ 0.16
SF3A2-204ENST00000589118 GNL1P36915 607 aaPredicted RBP16.05■□□□□ 0.16
SF3A2-204ENST00000589118 NOP14P78316 857 aaKnown RBP16.05■□□□□ 0.16
SF3A2-204ENST00000589118 MYO1EQ12965 1108 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 ZNF423Q2M1K9 1284 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 HSF5Q4G112 596 aaPredicted RBP16.05■□□□□ 0.16
SF3A2-204ENST00000589118 CCNI2Q6ZMN8 369 aaPredicted RBP16.05■□□□□ 0.16
SF3A2-204ENST00000589118 TOGARAM2Q6ZUX3 1019 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 DPH6Q7L8W6 267 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 OR6B3Q8NGW1 331 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 IPO4Q8TEX9 1081 aaKnown RBP16.05■□□□□ 0.16
SF3A2-204ENST00000589118 ADAMTS14Q8WXS8 1223 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 ANKRD36BP1Q96IX9 119 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 LRIG1Q96JA1 1093 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 CLIC6Q96NY7 704 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 CCDC86Q9H6F5 360 aaKnown RBP16.05■□□□□ 0.16
SF3A2-204ENST00000589118 DEC1Q9P2X7 70 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 EXOC7Q9UPT5 735 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 PRRT4C9JH25 899 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 TRIM66O15016 1216 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 CD2BP2O95400 341 aaKnown RBP16.04■□□□□ 0.16
SF3A2-204ENST00000589118 PFKLP17858 780 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 YWHAQP27348 245 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 NTSR1P30989 418 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 BTBD8Q5XKL5 378 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 SLC36A4Q6YBV0 504 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 NAXDQ8IW45 347 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 GPD1LQ8N335 351 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 TERB1Q8NA31 727 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 RDH13Q8NBN7 331 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 SNX25Q9H3E2 840 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 SPHK2Q9NRA0 654 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 SH3BP1Q9Y3L3 701 aa16.04■□□□□ 0.16
SF3A2-204ENST00000589118 E2F8A0AVK6 867 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 GOLGA8CPA6NN73 597 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.03■□□□□ 0.16
SF3A2-204ENST00000589118 TNNC2P02585 160 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 HOXD12P35452 270 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 GRIK2Q13002 908 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 TPGS1Q6ZTW0 290 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 CHPFQ8IZ52 775 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 BHMTQ93088 406 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 FBXO32Q969P5 355 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 P2RY11Q96G91 374 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 ZNF419Q96HQ0 510 aaPredicted RBP16.03■□□□□ 0.16
SF3A2-204ENST00000589118 SLITRK1Q96PX8 696 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 DNAJC17Q9NVM6 304 aaKnown RBP16.03■□□□□ 0.16
SF3A2-204ENST00000589118 CACNA2D2Q9NY47 1150 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 TBC1D14Q9P2M4 693 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 R3HCC1Q9Y3T6 440 aaKnown RBP16.03■□□□□ 0.16
SF3A2-204ENST00000589118 GTF3C3Q9Y5Q9 886 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 CLIC4Q9Y696 253 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 LOC400499M0QZD8 3231 aa16.03■□□□□ 0.16
SF3A2-204ENST00000589118 MYH10P35580 1976 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 TMEM131Q92545 1883 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 A0A1W2PQD8 194 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 NEDD8-MDP1E9PL57 170 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 NDUFS2O75306 463 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 TBX18O95935 607 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 SYPP08247 313 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 DPP6P42658 865 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 PPP3CCP48454 512 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 CDH8P55286 799 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 MAPRE1Q15691 268 aaKnown RBP16.02■□□□□ 0.16
SF3A2-204ENST00000589118 KIAA1324Q6UXG2 1013 aaKnown RBP16.02■□□□□ 0.16
SF3A2-204ENST00000589118 TRAPPC11Q7Z392 1133 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 NUP93Q8N1F7 819 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 SETD7Q8WTS6 366 aaKnown RBP16.02■□□□□ 0.16
SF3A2-204ENST00000589118 TMX3Q96JJ7 454 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 MRGPRX1Q96LB2 322 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 GMIPQ9P107 970 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 PCDHB13Q9Y5F0 798 aa16.02■□□□□ 0.16
SF3A2-204ENST00000589118 APC2O95996 2303 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 A0A087X0B3 334 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 A8MXQ7 604 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 HOXC11O43248 304 aaPredicted RBP16.01■□□□□ 0.15
SF3A2-204ENST00000589118 CBFA2T3O75081 653 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 PRB1P04280 392 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 GAP43P17677 238 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 HOXD13P35453 343 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 BNC1Q01954 994 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 DUOXA2Q1HG44 320 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 HECTD3Q5T447 861 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 RRAGBQ5VZM2 374 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 GRAMD4Q6IC98 578 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 FAM173BQ6P4H8 233 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 PAQR9Q6ZVX9 377 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 SV2BQ7L1I2 683 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 ZCCHC9Q8N567 271 aaKnown RBP16.01■□□□□ 0.15
SF3A2-204ENST00000589118 ZNF516Q92618 1163 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 MIR1-1HGQ9H1L0 117 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 PANK4Q9NVE7 773 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 PLK2Q9NYY3 685 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 NXF1Q9UBU9 619 aaKnown RBP16.01■□□□□ 0.15
SF3A2-204ENST00000589118 SEL1LQ9UBV2 794 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 BPTFQ12830 3046 aa16.01■□□□□ 0.15
SF3A2-204ENST00000589118 FAM149AA5PLN7 773 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms