RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 PAFAH1B1P43034 410 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 MARCKSL1P49006 195 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 RPL10AP62906 217 aaKnown RBP23.31■■□□□ 1.32
ATG4D-209ENST00000588857 CCDC14Q49A88 953 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 TPGS2Q68CL5 300 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 NUP93Q8N1F7 819 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 SCAMP5Q8TAC9 235 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 ZNF461Q8TAF7 563 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 AUTS2Q8WXX7 1259 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 PLVAPQ9BX97 442 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 ZBP1Q9H171 429 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 POPDC2Q9HBU9 364 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 AFF4Q9UHB7 1163 aaKnown RBP23.31■■□□□ 1.32
ATG4D-209ENST00000588857 USP3Q9Y6I4 520 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 ZNF638Q14966 1978 aaKnown RBP23.3■■□□□ 1.32
ATG4D-209ENST00000588857 VNN2O95498 520 aa23.3■■□□□ 1.32
ATG4D-209ENST00000588857 CTSAP10619 480 aa23.3■■□□□ 1.32
ATG4D-209ENST00000588857 MATKP42679 507 aa23.3■■□□□ 1.32
ATG4D-209ENST00000588857 PTPN9P43378 593 aa23.3■■□□□ 1.32
ATG4D-209ENST00000588857 GPR15P49685 360 aa23.3■■□□□ 1.32
ATG4D-209ENST00000588857 TAS2R40P59535 323 aa23.3■■□□□ 1.32
ATG4D-209ENST00000588857 IFRD2Q12894 506 aaPredicted RBP23.3■■□□□ 1.32
ATG4D-209ENST00000588857 HADHQ16836 314 aaKnown RBP23.3■■□□□ 1.32
ATG4D-209ENST00000588857 DEFB106AQ8N104 65 aa23.3■■□□□ 1.32
ATG4D-209ENST00000588857 CDX2Q99626 313 aaPredicted RBP23.3■■□□□ 1.32
ATG4D-209ENST00000588857 NCAPGQ9BPX3 1015 aa23.3■■□□□ 1.32
ATG4D-209ENST00000588857 NKX2-4Q9H2Z4 354 aa23.3■■□□□ 1.32
ATG4D-209ENST00000588857 FNIP2Q9P278 1114 aa23.3■■□□□ 1.32
ATG4D-209ENST00000588857 GREB1Q4ZG55 1949 aa23.3■■□□□ 1.32
ATG4D-209ENST00000588857 YJEFN3A6XGL0 299 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 E7ENQ6 273 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 CAPN9O14815 690 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 LRCH4O75427 683 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 MYOGP15173 224 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 TUFMP49411 452 aaKnown RBP23.29■■□□□ 1.32
ATG4D-209ENST00000588857 ATP11AP98196 1134 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 RAB33AQ14088 237 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 CDO1Q16878 200 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 C15orf59Q2T9L4 293 aaPredicted RBP23.29■■□□□ 1.32
ATG4D-209ENST00000588857 LRRC38Q5VT99 294 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 SDHAF4Q5VUM1 108 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 TMC7Q7Z402 723 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 SPATA17Q96L03 361 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 DDX23Q9BUQ8 820 aaKnown RBP23.29■■□□□ 1.32
ATG4D-209ENST00000588857 TRIM62Q9BVG3 475 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 CRISPLD1Q9H336 500 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 FBXO44Q9H4M3 255 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 SLC28A3Q9HAS3 691 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 LZTS1Q9Y250 596 aa23.29■■□□□ 1.32
ATG4D-209ENST00000588857 SOAT2O75908 522 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 ABLIM3O94929 683 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 LTFP02788 710 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 NOS2P35228 1153 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 PCK1P35558 622 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 GJC1P36383 396 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 DCAF6Q58WW2 860 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 DCAF12L1Q5VU92 463 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 FAM172AQ8WUF8 416 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 MS4A14Q96JA4 679 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 SLC2A13Q96QE2 648 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 NGRNQ9NPE2 291 aaKnown RBP23.28■■□□□ 1.32
ATG4D-209ENST00000588857 HSFX1Q9UBD0 423 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 STAP1Q9ULZ2 295 aa23.28■■□□□ 1.32
ATG4D-209ENST00000588857 KRT7P08729 469 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 ATF2P15336 505 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 ZNF211Q13398 564 aaPredicted RBP23.27■■□□□ 1.32
ATG4D-209ENST00000588857 GRIN2CQ14957 1233 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 ODF2Q5BJF6 829 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 ZFYVE27Q5T4F4 411 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 SEL1L2Q5TEA6 688 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 HFE2Q6ZVN8 426 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 ARFGAP1Q8N6T3 406 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 C17orf80Q9BSJ5 609 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 RXFP1Q9HBX9 757 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 ALG13Q9NP73 1137 aaKnown RBP23.27■■□□□ 1.32
ATG4D-209ENST00000588857 CDH23Q9H251 3354 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 PLXNA3P51805 1871 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 CTAGE15A4D2H0 777 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 LILRB3O75022 631 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 RTN3O95197 1032 aaPredicted RBP23.27■■□□□ 1.32
ATG4D-209ENST00000588857 CXCL14O95715 111 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 CTAGE8P0CG41 777 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 TCF4P15884 667 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 MIPP30301 263 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 CLUL1Q15846 466 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 SLC25A52Q3SY17 297 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 SH3PXD2AQ5TCZ1 1133 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 DENND5BQ6ZUT9 1274 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 BHLHA9Q7RTU4 235 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 POLNQ7Z5Q5 900 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 CTAGE6Q86UF2 777 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 CTAGE4Q8IX94 777 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 KATNAL2Q8IYT4 538 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 ACTRT1Q8TDG2 376 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 GPR152Q8TDT2 470 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 CEP295NLQ96MC4 621 aa23.27■■□□□ 1.32
ATG4D-209ENST00000588857 PGRMC1O00264 195 aaKnown RBP23.26■■□□□ 1.31
ATG4D-209ENST00000588857 TEX28O15482 410 aa23.26■■□□□ 1.31
ATG4D-209ENST00000588857 CA3P07451 260 aa23.26■■□□□ 1.31
ATG4D-209ENST00000588857 NCAM1P13591 858 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms