RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 BST2Q10589 180 aaKnown RBP20.23■□□□□ 0.83
CIRBP-217ENST00000588230 RUNX3Q13761 415 aa20.23■□□□□ 0.83
CIRBP-217ENST00000588230 TCP11X2Q5H9J9 407 aa20.23■□□□□ 0.83
CIRBP-217ENST00000588230 TRIM68Q6AZZ1 485 aa20.23■□□□□ 0.83
CIRBP-217ENST00000588230 C1orf228Q6PIY5 440 aa20.23■□□□□ 0.83
CIRBP-217ENST00000588230 TXNDC11Q6PKC3 985 aa20.23■□□□□ 0.83
CIRBP-217ENST00000588230 C11orf57Q6ZUT1 292 aaPredicted RBP20.23■□□□□ 0.83
CIRBP-217ENST00000588230 ASCL5Q7RTU5 278 aa20.23■□□□□ 0.83
CIRBP-217ENST00000588230 RALGPS2Q86X27 583 aaPredicted RBP20.23■□□□□ 0.83
CIRBP-217ENST00000588230 UBA3Q8TBC4 463 aa20.23■□□□□ 0.83
CIRBP-217ENST00000588230 TFAP2BQ92481 460 aa20.23■□□□□ 0.83
CIRBP-217ENST00000588230 EBF3Q9H4W6 596 aa20.23■□□□□ 0.83
CIRBP-217ENST00000588230 CCSER2Q9H7U1 834 aa20.23■□□□□ 0.83
CIRBP-217ENST00000588230 NDRG2Q9UN36 371 aaKnown RBP20.23■□□□□ 0.83
CIRBP-217ENST00000588230 FRYLO94915 3013 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 PRR23AA6NEV1 266 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 SPECC1L-ADORA2AF8WAN1 911 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 TLR5O60602 858 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 SP9P0CG40 484 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 BRD2P25440 801 aaKnown RBP20.22■□□□□ 0.83
CIRBP-217ENST00000588230 PGFP49763 221 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 STILQ15468 1287 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 CNGA2Q16280 664 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 CAVIN1Q6NZI2 390 aaKnown RBP20.22■□□□□ 0.83
CIRBP-217ENST00000588230 GJB7Q6PEY0 223 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 LCLAT1Q6UWP7 414 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 CCDC186Q7Z3E2 898 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 DDX42Q86XP3 938 aaKnown RBP eCLIP20.22■□□□□ 0.832e-6■■■□□ 17.9
CIRBP-217ENST00000588230 OSCP1Q8WVF1 389 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 CHFRQ96EP1 664 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 HPS4Q9NQG7 708 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 APEX2Q9UBZ4 518 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 WNT6Q9Y6F9 365 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 USP3Q9Y6I4 520 aa20.22■□□□□ 0.83
CIRBP-217ENST00000588230 GPR179Q6PRD1 2367 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 A0A1W2PQH9 124 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 XPO1O14980 1071 aaKnown RBP20.21■□□□□ 0.83
CIRBP-217ENST00000588230 GFRA3O60609 400 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 SETSIPP0DME0 302 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 ARSAP15289 507 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 CTHP32929 405 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 PSEN1P49768 467 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 TKTL1P51854 596 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 ZNF132P52740 706 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 ZXDBP98169 803 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 ARHGAP44Q17R89 818 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 MIIPQ5JXC2 388 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 CPA6Q8N4T0 437 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 CHRDQ9H2X0 955 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 NMUR1Q9HB89 426 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 LRRC4Q9HBW1 653 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 FANCLQ9NW38 375 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 CFAP97Q9P2B7 532 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 NAGPAQ9UK23 515 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 CNTN6Q9UQ52 1028 aa20.21■□□□□ 0.83
CIRBP-217ENST00000588230 MYO16Q9Y6X6 1858 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 PTPRZ1P23471 2315 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-217ENST00000588230 HELZP42694 1942 aaKnown RBP20.2■□□□□ 0.82
CIRBP-217ENST00000588230 OTOL1A6NHN0 477 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-217ENST00000588230 TULP2O00295 520 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 CALCAP01258 141 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 TPM2P07951 284 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 CHRNB1P11230 501 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 USP8P40818 1118 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 AMPD2Q01433 879 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 MYL5Q02045 173 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 APBA1Q02410 837 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 TYRO3Q06418 890 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 RAB41Q5JT25 222 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 KIAA1958Q8N8K9 716 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 ATP2A3Q93084 1043 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 ZSWIM1Q9BR11 485 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 LINC00597Q9H2U6 94 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 CYLDQ9NQC7 956 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 PRMT8Q9NR22 394 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-217ENST00000588230 SPATA6Q9NWH7 488 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-217ENST00000588230 TAB2Q9NYJ8 693 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.2■□□□□ 0.82
CIRBP-217ENST00000588230 ZNF292O60281 2723 aa20.2■□□□□ 0.82
CIRBP-217ENST00000588230 M0QYV0 167 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 SLC9A3R1O14745 358 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-217ENST00000588230 RALAP11233 206 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 RARGP13631 454 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 ATP5C1P36542 298 aaKnown RBP20.19■□□□□ 0.82
CIRBP-217ENST00000588230 PLA2G4AP47712 749 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 MTAPQ13126 283 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 NR1H3Q13133 447 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 GAS6Q14393 721 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 EML3Q32P44 896 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 C10orf120Q5SQS8 335 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 CDKAL1Q5VV42 579 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 SCD5Q86SK9 330 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 TADA2BQ86TJ2 420 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 ARHGAP18Q8N392 663 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 NAT10Q9H0A0 1025 aaKnown RBP20.19■□□□□ 0.82
CIRBP-217ENST00000588230 ECT2Q9H8V3 914 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.19■□□□□ 0.82
CIRBP-217ENST00000588230 OSER1Q9NX31 292 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 CLIC5Q9NZA1 410 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 DNAJC12Q9UKB3 198 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms