RNA–Protein interactions for RNA: ENST00000587246.1

NEDD4L-217, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-217ENST00000587246 ZNF449Q6P9G9 518 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 DARS2Q6PI48 645 aaKnown RBP3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 LDHAL6AQ6ZMR3 332 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 PTF1AQ7RTS3 328 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 ZNF804AQ7Z570 1209 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 BRSK2Q8IWQ3 736 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 BOLLQ8N9W6 283 aaKnown RBP3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 IL17REQ8NFR9 667 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 RP9Q8TA86 221 aaKnown RBP3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 POF1BQ8WVV4 589 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 TFAP2BQ92481 460 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 TBC1D5Q92609 795 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 ATP6V1E2Q96A05 226 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 TTC17Q96AE7 1141 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 SH3KBP1Q96B97 665 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 CENPTQ96BT3 561 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 NMD3Q96D46 503 aaKnown RBP3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 HVCN1Q96D96 273 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 ZNF764Q96H86 408 aaPredicted RBP3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 TNIP3Q96KP6 325 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 TBATAQ96M53 351 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 CFAP53Q96M91 514 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 BBC3Q96PG8 261 aaPredicted RBP3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 IWS1Q96ST2 819 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 C22orf23Q9BZE7 217 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 TTYH3Q9C0H2 523 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 DHX36Q9H2U1 1008 aaKnown RBP3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 ATP6V0A4Q9HBG4 840 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 SMYD2Q9NRG4 433 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 BLOC1S4Q9NUP1 217 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 TRMT13Q9NUP7 481 aaKnown RBP3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 PTGFRNQ9P2B2 879 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 AFF4Q9UHB7 1163 aaKnown RBP3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 DDX20Q9UHI6 824 aaKnown RBP3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 RABL2BQ9UNT1 228 aa3.79□□□□□ -1.8
NEDD4L-217ENST00000587246 hCG_1642624A0A1W2PR95 340 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 TRIM43BA6NCK2 446 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 OVOL3O00110 214 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 CCP110O43303 1012 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 GFPT2O94808 682 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 MBD4O95243 580 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 IGLV2-14P01704 120 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 PRKCBP05771 671 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 DLDP09622 509 aaKnown RBP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 IFIT1P09914 478 aaKnown RBP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 IDEP14735 1019 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 CHRM3P20309 590 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 CAPN3P20807 821 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 KLRC1P26715 233 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 CASQ1P31415 396 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 PDE6CP51160 858 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 DGKEP52429 567 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 ZNF132P52740 706 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 LILRA4P59901 499 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 BOP1Q14137 746 aaKnown RBP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 DCTN1Q14203 1278 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 CNN3Q15417 329 aaKnown RBP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 INSCQ1MX18 579 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 AARS2Q5JTZ9 985 aaKnown RBP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 AKNAD1Q5T1N1 836 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 TMEM63BQ5T3F8 832 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 VPS53Q5VIR6 699 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 SWSAP1Q6NVH7 229 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 DPY19L2P1Q6NXN4 242 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 SLC15A3Q8IY34 581 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 FAM186BQ8IYM0 893 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 PCSK9Q8NBP7 692 aaKnown RBP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 NAXEQ8NCW5 288 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 ZFPM2Q8WW38 1151 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 IPCEF1Q8WWN9 437 aaPredicted RBP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 LRTOMTQ8WZ04 291 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 TRIM43Q96BQ3 446 aaPredicted RBP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 RSPRY1Q96DX4 576 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 APIPQ96GX9 242 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 MSLNLQ96KJ4 702 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 SPAG5Q96R06 1193 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 HAPLN3Q96S86 360 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 P2RX7Q99572 595 aaKnown RBP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 BTBD1Q9H0C5 482 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 PRKRIP1Q9H875 184 aaPredicted RBP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 DDX21Q9NR30 783 aaKnown RBP eCLIP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 ARHGEF3Q9NR81 526 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 MRPS18AQ9NVS2 196 aaKnown RBP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 ARPP21Q9UBL0 812 aaPredicted RBP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 STAP2Q9UGK3 403 aa3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.78□□□□□ -1.8
NEDD4L-217ENST00000587246 SPATA31A6Q5VVP1 1343 aa3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 FRMPD2Q68DX3 1309 aaPredicted RBP3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 LINC00473A8K010 186 aa3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 VWC2LB2RUY7 222 aa3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 PES1O00541 588 aaKnown RBP3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 KITP10721 976 aa3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 MYF5P13349 255 aa3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 NDUFB7P17568 137 aa3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 ITPKBP27987 946 aa3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 KIF5BP33176 963 aa3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 KRT20P35900 424 aa3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 PLA2G5P39877 138 aa3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 RAD52P43351 418 aa3.77□□□□□ -1.81
NEDD4L-217ENST00000587246 COPAP53621 1224 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms